Gene Dtur_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1007 
Symbol 
ID7081815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1027057 
End bp1027677 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content37% 
IMG OID643458087 
Productribosomal protein S4 
Protein accessionYP_002352901 
Protein GI217967395 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000469854 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAT ATACAGGACC AGATTGTCGT TTATGTAGAA GAGAAGGTAT GAAGTTATTT 
TTAAAAGGGA CAAAATGTTT TTCCGAAAAG TGTCCCTTTG AAAGAAGACC ATTTCCACCT
GGTCAACATG GTAGAGCTCA AAGAAAATTA ACTGAGTACG GATTAAGGTT AAGAGAAAAA
CAAAGAGCAA AAAGAATATA CGGAGTATTA GAAAGACAAT TTAGGCGATA CTTTGAGATA
GCCTCTAAGG GTAGAGGTGT TACGGGAGAA AGGTTATTGC AACTTTTGGA AACAAGACTT
GATAATGTAG TGTACAGGCT GGGTTGGGCT TTATCTCGAG CTCAAGCAAG GCAGATTGTG
TCTCATGGTA AAATTGCTGT GAATGGTAAA AGAGTTAACA TACCCTCTTA TAATTTAAAG
CCAGGAGATG TGGTAGAGCT CCTTGATAAA GATTTAATTC CTGTACAAGA AGCCATATCA
GTTTTTGGAA ATAAGAGTGT TCCAGCCTGG TTAGAATTGG ATAGGGAAAA CCTTAGAGGA
AAAGTTTTGA GATTACCAAA GAGAGAAGAA ATAGATACTC CTGTCCAAGA ACAGCTTATT
GTAGAGTTCT ACTCCAGATA A
 
Protein sequence
MARYTGPDCR LCRREGMKLF LKGTKCFSEK CPFERRPFPP GQHGRAQRKL TEYGLRLREK 
QRAKRIYGVL ERQFRRYFEI ASKGRGVTGE RLLQLLETRL DNVVYRLGWA LSRAQARQIV
SHGKIAVNGK RVNIPSYNLK PGDVVELLDK DLIPVQEAIS VFGNKSVPAW LELDRENLRG
KVLRLPKREE IDTPVQEQLI VEFYSR