Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtur_0975 |
Symbol | |
ID | 7082934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dictyoglomus turgidum DSM 6724 |
Kingdom | Bacteria |
Replicon accession | NC_011661 |
Strand | + |
Start bp | 1005689 |
End bp | 1009972 |
Gene Length | 4284 bp |
Protein Length | 1427 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643458055 |
Product | DNA-directed RNA polymerase, beta' subunit |
Protein accession | YP_002352869 |
Protein GI | 217967363 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form [TIGR02388] DNA-directed RNA polymerase, beta'' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00330358 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGATAA AAGATTTTGA TAAATTAGTT TTTGGTTTAG CATCACCAGA AGATATTTTA AGTTGGTCTT ACGGTGAAGT TAAGAAACCG GAGACTATTA ATTATAGAAC CTTCAAACCT GAAAGAGATG GACTTTTTTG TGAGAAGATC TTTGGACCTG TGAAGGATTA TGAGTGTCAT TGCGGTAAGT ATAAAGGGCA AAGATATGAA GGTATAACTT GTGATAGATG TGGTGTCACA GTAACTAAGA GCTCAGTGAG AAGAGAGAGA ATGGGACATA TAAAACTTGC TGTACCTGTA GTACATATTT GGTATTTTAA AAATGTTCCT AACTATATAG GGCTACTTCT TAATATAAGC AGTAAACAAC TTGAGGAAGT AATTTATTAT CATTCATATA TTGTGTTAGA TCCAGGGGAT ACTCCTTTAC AGAAAATGCA GGTTTTAACA GAAGACGAAT ATGAAAAAGC TCTTAATGAG TTTGGTAATA GTTTTAAAGT AGGAATGGGT GCAGAAGCTA TTAAAAAGCT TTTGAGAGAT TTAGATTTAG AAGAATTGTC TTACGACTTA AAAAAACAAA TCAACGAAAT ACAAGGTCAG AAAAAGGCGA AACTTATCAA AAGATTAGAG ATTGTAGAAA GTTTTAGGCT TTCTGGTAAT AAACCTGAGT GGATGGTACT TGAGGTACTT CCTGTTATTC CTCCTGATTT GAGGCCTATG GTACAACTTG AAGGTGGCAA ATTTGCCACT TCTGATCTTA ATGATCTTTA TAGGAGAGTT ATTAACAGAA ATAACCGTCT TGCAAAGCTT TTAGAAATAA ATGCCCCAGA GATTATTGTT AGAAATGAAA AGAGAATGTT GCAAGAAGCA GTAGATGCTC TTATTGATAA TGGAAGAAGG GGTAAGCCTG TGACTAACGC TAGTGGAAGA CCCTTGAGGT CTTTATCAGA TATCTTAGAG GGTAAACAAG GAAGATTCAG ACAGAATCTT TTAGGAAAAA GAGTTGACTT TTCTGGAAGA GCGGTTATTG TGGTTGGACC TGAATTAAAA TTACATCAAT GTGGACTTCC TAAAAAGATG GCTTTAGAAT TATTTAAACC TTTTGTAATA AACAAGTTAA TAGAACATGG ATATGCTACT AACGTAAAGA ATGCAAGAAA AAAAGTTGAA AGAGAAGCCT CTGAGGTATG GGATGTTTTA GATGAAATTA TTAAGGAAAA ATTAGTACTT TTAAATCGTG CTCCTACTTT GCACAGAGTT AGTATACAGG CATTTGAGCC TAAGTTAATT GATGGTAATG CAATTCAATT ACATCCCTTA GTATGTCCAC CGTATAATGC TGACTTCGAT GGGGACCAGA TGGCGGTTCA TGTGCCACTA TCCCTTGAGG CCCAAGCAGA AGCAAGAATT TTGATGTTGT CATCCAATAA CCTTATATCT CCAGCTCATG GAAAACCTCT TACCTTACCA ACTCAGGATG TGGTTCTTGG ACTTTATTAT TTAACTATAA TGGTACCCGG AAGAGAGATT GAGGATAAAA GATTTGCGAC CCCGGAAGAG GTTTTGTTGG CTTTAGAGGA GAAAAAAGTT GATCTACATT CAAAGATATA TGTCCACAAG AGAGGAATAG AAGAAACATA TAATATATCT TTACCTGAGA GCCCTATGTT TATAGAGACT ACACCAGGAA GGTTAATTTT GAATGAGATT GTTCCTGAGA AGTTAAGATA TTACAACGTC ACTATGAATA GAAGAGAAAT TAGAAAAATT GTCGAAAAAT GTTTTGAGAT TTATGGTTGG AGCAAGACAG CAGAATTCTT AGACGAACTT AAAAGACTTG GGTTTGAATA TGCTACAAAA GCAGGTGTAA GTTTTTCCAT AGTAGATATT GAAATACCTA AGGAGGCAAA AGAGAAGGTT ATAAAGAAAG CGGAAGAGGA GTCTATGCTT CTTCAAAAAG CTGTAGAGAG TGGTTTGTAT TCTGAGGAAG AAAGATATCA AAGAGCTATT GAGATATGGA CAAAGGCAAC TGAAGAAGTA AAGGATATAA TGCTTGCTAA TTTTGGTATT TTAAATTCTG TGTATATGAT GGCGTTTTCT GGTGCTAGAG GTAATGTGGA CCAGGTAAGA CAGCTTGCAG CAATGAGAGG TTTGATGGCT GATCCGTCAG GACAAATTAT GGACATACCT ATTAAGTCAA GCTTCTACGA AGGTTTAACT GTATCAGAAC ATTTTATTTC TTCTTATGGA GCAAGGAAGG GAGTAGTGGA CACAGCATTG AGAACTTCTG ATTCAGGATA CTTAACCAGA AGACTTGTAG ATGTAGCTCA AAGTCTGGTT ATTAGAGAGG AAGATTGTGG TACTGAGGAT GGGATATATG TAGAGCCTCT GGAGGATGAA GGGAAAATAG TATTAAGCTT GAAGGATAGA ATCATAGGAA GATTTGCTGC TGAAGATGTT TATAATGATA AAGGAGAATT AATTATTGCT AAGAATGAGT ATATAGATGT GGAAAAAGCA AAATTAGTGG AGAGGTTTGG TATAAAGAGG GTAAAGATCA GATCTCCTAT GACTTGTAAG AGTGAGAAAG GGATATGTCA AAAATGTTAT GGGGAGGATT TAGCAACTCA TAGGCTTGTT AACATAGGAG AAGCGGTAGG AGTAATAGCT GCCCAATCTA TTGGAGAGCC TGGAACTCAG CTTACTATGA GAACCTTCCA CACAGGTGGT GTTGCTTTAA CTTCTTTGAA TTATCAGAAT ATTCAATTTA GAGTGACAGG AAGGGTTGAT TTTTTGAATT TAAAGTTAAA AGAAAGATTT GAAGTCTTGG GTAAAAAAGA AAAAATGGTA GTTGGACGTA ATGGAAGAGC AGTTGTTAAA GGAGAAGGCG AAGAAGAAAT TGTACTTCCA CCAGGAACCA TTGTGTCTAT AGATTCTGGA ACCGATGTTA CTAAGGGAAT GAGTTTAGGA TATATAGATC CTAATTTAAG ATATATAGCT TCACCATTTA CTGGAAAGGT TATAAGAGTT GAAAAGGTAG GAGAAAGTTA CAATAAAAAA TTTACTTTTC TCAATGTGAA ATACGATAGA GATCTTAATA ATTATGAGTT GTCTTATAAC GAAGAAGCAC ATCCGATTTT CTGTTCTGTA GTGTTGTTGG ATGAAACTGG TAATGAGAAA AGAATAGAAT TACCGGAAGG TGTGGCATTT CTCTTTAAAA TTGGAGACTT TATTAATGAA GGAGATATAA TTGCCGAATA TAGTAGAGAG ACCATGAAGA TTCAGGCTTG CGAAGAAGGA AAAGTGGTAG ATATTCTTGA GAGAAATGGA GAAATAATAG ATCGAATTGT GGCAACAGGT GAAGCTGTAA TTATCATAAG AAATAGCGAA GGAAGAGAAG TTGAATATAG AATTCCTCGT GGACTTAAAT TACATGTAAA TGCAGAAGAT AATGTAGAAT TTGGCACTAT TCTTGCTTAC TTCCCTGCAT ACCAACAGAA AACTGCAAAA ACAGAAGATA TCGTTCAAGG TCTTCCTCGT GTAGAGGAGT TGTTTGAGGC AAGGAAACCA AAAGGAAAAT CTATTATAGC TGGTGTTAGT GGTATTGTGA AAATAACAAG GACTAAATCA GGAGAAAAGA TAGTGATTGA AGGAGAAAAT GGAAAAGATG AGCATATCTT GCCACCTAAT GCTCAACTTT TGGTTAAAGA AGGCGATTAT GTAACAGTGG GACAAGAGTT GACTAAAGGA TATAGAAATC CTGCGGAAAT TCTTGCTAAT GAAGGTCTTG CTGCTGTACA GAGATATATT GTGGATGAAG TGCAAAAGGT TTATCTCAAA CAAGGAGCAG AGATTAACGA TAAGCACATA GAAGTAATAG TTAGACAGAT GACTAATAGA GTAAGGATTG AAGATCCAGG AGATAGCAAC TTCTTGTTTG GTCAACTTGT TAACAAAGTG ACCTTTGAAA AGGTGAAACA GCAATTAGAA GAAGAAGGAA AAAGACCTCC TATAGCAAGA GAGGTTGTAC TTGGTATTAC AAAAGCAGCC TTAACCACAG AAAGTGTAAT ATCTGCAGCT TCTTTCCAAG AGACTACGAG GGTTTTAGCT GAAGCAGCAG TTAAAGGAAA AGAAGACTAC CTGGAGGGAT TAAAAGAAAA TGTGATAATA GGCAGATTAA TTCCTGCAGG CACAGGGCTC TTTAGGAAAA TTATTCCTCA AAAAGTCTCC GCTAAGAAAG TAGAGGTTTT GGAAGATGGT GGAGAAATTG AAATTAACTC TTGA
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Protein sequence | MKIKDFDKLV FGLASPEDIL SWSYGEVKKP ETINYRTFKP ERDGLFCEKI FGPVKDYECH CGKYKGQRYE GITCDRCGVT VTKSSVRRER MGHIKLAVPV VHIWYFKNVP NYIGLLLNIS SKQLEEVIYY HSYIVLDPGD TPLQKMQVLT EDEYEKALNE FGNSFKVGMG AEAIKKLLRD LDLEELSYDL KKQINEIQGQ KKAKLIKRLE IVESFRLSGN KPEWMVLEVL PVIPPDLRPM VQLEGGKFAT SDLNDLYRRV INRNNRLAKL LEINAPEIIV RNEKRMLQEA VDALIDNGRR GKPVTNASGR PLRSLSDILE GKQGRFRQNL LGKRVDFSGR AVIVVGPELK LHQCGLPKKM ALELFKPFVI NKLIEHGYAT NVKNARKKVE REASEVWDVL DEIIKEKLVL LNRAPTLHRV SIQAFEPKLI DGNAIQLHPL VCPPYNADFD GDQMAVHVPL SLEAQAEARI LMLSSNNLIS PAHGKPLTLP TQDVVLGLYY LTIMVPGREI EDKRFATPEE VLLALEEKKV DLHSKIYVHK RGIEETYNIS LPESPMFIET TPGRLILNEI VPEKLRYYNV TMNRREIRKI VEKCFEIYGW SKTAEFLDEL KRLGFEYATK AGVSFSIVDI EIPKEAKEKV IKKAEEESML LQKAVESGLY SEEERYQRAI EIWTKATEEV KDIMLANFGI LNSVYMMAFS GARGNVDQVR QLAAMRGLMA DPSGQIMDIP IKSSFYEGLT VSEHFISSYG ARKGVVDTAL RTSDSGYLTR RLVDVAQSLV IREEDCGTED GIYVEPLEDE GKIVLSLKDR IIGRFAAEDV YNDKGELIIA KNEYIDVEKA KLVERFGIKR VKIRSPMTCK SEKGICQKCY GEDLATHRLV NIGEAVGVIA AQSIGEPGTQ LTMRTFHTGG VALTSLNYQN IQFRVTGRVD FLNLKLKERF EVLGKKEKMV VGRNGRAVVK GEGEEEIVLP PGTIVSIDSG TDVTKGMSLG YIDPNLRYIA SPFTGKVIRV EKVGESYNKK FTFLNVKYDR DLNNYELSYN EEAHPIFCSV VLLDETGNEK RIELPEGVAF LFKIGDFINE GDIIAEYSRE TMKIQACEEG KVVDILERNG EIIDRIVATG EAVIIIRNSE GREVEYRIPR GLKLHVNAED NVEFGTILAY FPAYQQKTAK TEDIVQGLPR VEELFEARKP KGKSIIAGVS GIVKITRTKS GEKIVIEGEN GKDEHILPPN AQLLVKEGDY VTVGQELTKG YRNPAEILAN EGLAAVQRYI VDEVQKVYLK QGAEINDKHI EVIVRQMTNR VRIEDPGDSN FLFGQLVNKV TFEKVKQQLE EEGKRPPIAR EVVLGITKAA LTTESVISAA SFQETTRVLA EAAVKGKEDY LEGLKENVII GRLIPAGTGL FRKIIPQKVS AKKVEVLEDG GEIEINS
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