Gene Dtur_0867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0867 
Symbol 
ID7082820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp893723 
End bp894325 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content31% 
IMG OID643457941 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002352762 
Protein GI217967256 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.23056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG ACTTTACTGA TTTGTTAAGA AAAGCAGATG ACCTTAAACA AAGAGGTAAA 
CTTTATAAAG CTATAACTCT CTATGAAGAG ATTTTGTCAG CAATTGATGA TAACGAACTC
TTGGAATGGC TTAGGATAAC CCTTGCAGAT CTTTATTTCT GGGTGAAAGA GTTTGATAAA
GCAAAAAACT TAGTAATGGA TAATATTAAT CAGAATCCTC AAGAAGCCTT TAACTATTAC
TTTATGGGGT TTCTTTTAAT AGGAGAAGGT AAATTTTGTG AGGCTAAAGA ATACTTTAAT
ATGGCTTGTG AAATTGAACC TGAGAATCCT GAGTATTTAA GAGGATTGGG ATTAGTTGAA
TTTTTATTAG ACAATTTTGA TACTGCTGAG AATATTTTAA GAGAGGTTTT GAAAAGAGAT
CCTGAAAATA GTGCTGCAAG AGATAATCTT ATTGAGTTAT TGATAAGAAT TGGGAAAGTA
GAAGAAGCAG AAAAAGAAAT CTCCGAATTT AGGAGAAAGG ATCCAAAGGA TTGGCAAATT
TTATATAGGG TTCAAGAATT GAGAAATAAG AAAGAGGAAA TAAAAAAAGG AGGAAGCTCA
TAA
 
Protein sequence
MKKDFTDLLR KADDLKQRGK LYKAITLYEE ILSAIDDNEL LEWLRITLAD LYFWVKEFDK 
AKNLVMDNIN QNPQEAFNYY FMGFLLIGEG KFCEAKEYFN MACEIEPENP EYLRGLGLVE
FLLDNFDTAE NILREVLKRD PENSAARDNL IELLIRIGKV EEAEKEISEF RRKDPKDWQI
LYRVQELRNK KEEIKKGGSS