Gene Dtur_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0797 
Symbol 
ID7082089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand+ 
Start bp817915 
End bp818982 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content39% 
IMG OID643457870 
Product1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 
Protein accessionYP_002352692 
Protein GI217967186 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0806042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAA AAATAACAAG AGTTGTAAAG GTTGGTAATA TAGAGATAGG TGGTAATAAT 
CCTATAAGGG TTCAGACTAT GACTAAGACA CCTACGGTGG ATGTTAAAGC TACCGTAAGG 
CAAATAAGGA GACTTGCTAA AAAGGGTTGT GAGATTGTTA GGGTTGGAGT ACCTGATAAA 
GAATCGGCTC TTGCACTGGG AAAGATAAAA AAGGAAAGTC CTATCCCTAT TGTAGCTGAC 
ATACATTTTG ATTACCGTCT TGCTCTGACA GCTTTAGAAC AAGGGGTAGA TAAGTTAAGA 
CTGAATCCTG GTAACATTAA AAATCCCAAA TATGTTTCTA TTATTGCCAA AGAGGCAAAG 
GCTCGGGGGG TGCCTATAAG GGTTGGTAGT AATGCTGGAT CCTTACCTAA GGAAATTCTG 
GAAAAATATG GTGGACTTAC TTCAGAGGCA TTAGTAGAAA GTGCTCTTAA TGAAGTTAGG 
CTTTTAGAGG ACAATGATTT TACGGATATT GTAATATCTG TAAAAGCCTC CTCTGTACCT 
TTAACAGTAG AAGCCTATAG GCTTTTATCA GAAAAGGTAG ATTATCCTCT GCATATTGGT 
ATAACGGAGG CAGGTACTTT ATTTCCTGGA ACTATAAGAT CGTCGGTGGG CTTGGGCATC 
CTTCTTTATG AGGGTATAGG TGACACTATA AGGGTCTCTT TGTCTGCTCC TCCTGATAAA 
GAGGTTGAAG TTGCGTATGA AATTCTTGAT AGCCTTGAGC TGAGAAGGAA GGGATTAAGG 
GTTTTGGCTT GTCCTATGTG TGCTCGGTCG CATTTTCCAG TTCAGGAGGT AGCAAAGGAA 
ATTGAAAAAA GGTTTGGGGA TTATCCTTTA AACTTGGTAA TTGCTGTGAT GGGCTGTGAA 
GTCAACGGTC CGGGAGAAGC CAAATGGGCT GATATTGGTA TTACAGGATC TAAAGAAAGA 
GTTATAATTT TTAAGAAAGG GAAAATAATC AAAGAGACTA GTTTCGAGAG AATAATTTCC 
GAATTAGAAG AGGAACTAAC TAAGATCAAG GAGGTGAACT CAAATTAG
 
Protein sequence
MKRKITRVVK VGNIEIGGNN PIRVQTMTKT PTVDVKATVR QIRRLAKKGC EIVRVGVPDK 
ESALALGKIK KESPIPIVAD IHFDYRLALT ALEQGVDKLR LNPGNIKNPK YVSIIAKEAK 
ARGVPIRVGS NAGSLPKEIL EKYGGLTSEA LVESALNEVR LLEDNDFTDI VISVKASSVP 
LTVEAYRLLS EKVDYPLHIG ITEAGTLFPG TIRSSVGLGI LLYEGIGDTI RVSLSAPPDK 
EVEVAYEILD SLELRRKGLR VLACPMCARS HFPVQEVAKE IEKRFGDYPL NLVIAVMGCE 
VNGPGEAKWA DIGITGSKER VIIFKKGKII KETSFERIIS ELEEELTKIK EVNSN