Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtur_0603 |
Symbol | |
ID | 7081643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dictyoglomus turgidum DSM 6724 |
Kingdom | Bacteria |
Replicon accession | NC_011661 |
Strand | - |
Start bp | 601667 |
End bp | 604741 |
Gene Length | 3075 bp |
Protein Length | 1024 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643457679 |
Product | M6 family metalloprotease domain protein |
Protein accession | YP_002352505 |
Protein GI | 217966999 |
COG category | [S] Function unknown |
COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.460158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAA AACTTGTACT AACCCTTAGT CTTTTTATCC TTTTAGTCCT TATAATAAAC ATTTCTTTTG CCCAAGTCTT CCCATTAACC AAAGTACATA TAATGCCACC CCACGAAAAG CTTATTGAAA AAAAGGTAAA ACTTCCAAAA CTCCCTGAAA TTACTCCTCA AAATATACCC CAAGGAACAA AAATCTATGG AACTATTGAA AAAGCCCAAG GTATAGGTAA AGCAATTGTA ATACCTGTAG AATTTACCGA TAAACCAAGA CAGCCCGAAG ATATTATACC TTCAAACTAT TTTGACATAC TTTTTAATAG TGTAAAGGCA GATTGGAGCA ATATAAACCC ATACAACGTA GGTAGTGTAA GAGAATTTTA TTTAGAAAAT TCCTATGGAC AATTTGATAT AACTGCAACA GTACTTCCCT GGTATACTGC CCAAAATACC TACTCCTACT ATATAAACGA TGGTAATAAT GGATTTAATG GAGGGGTATT TGTATTAGTA AAAGAAGTAC TACAGCATGC AGTAGATATT GGATATGATC TAAGAAATTA TGATGTAGTT TTTGTAATTC ATAGTGGACA AGGTGCCGAG TGGACAGGAT ATCCAAATGA TATTTGGTCC CATGCCTCTA CAGTATATGT TAATATTGGT GGAAAAAATG TGCCTATAAG ATATTCCATT GAACCAGAAT ATATGGAAGA TTATGATACT CAAGGAAATC CTGTAATAAT GCCTCAAACT GTAGGTGTAT TTGTGCATGA GATGGGACAT TCTTTTGGAC ACCTTCCAGA TCTTTATGAT AGAGACTATT CATCTTTGGG GCTTGGTAGG TGGAGCTTAA TGGCAGCAGG ATCTTGGAAT GGGCCTCAAG GTCCAGGTGG ATATTCCATA GGAGGAGGAC CATCTCATTT TGATGCTTGG AGTAAGATTC AACTTGGATG GATAACCCCA ACTGTTCCTA CCAATGATCT AACTAATGTA AATATTCCAC CGGTAGAAAC AAATCCTGTA GTATATAAAC TTTGGACCGA TGGGGCAGAA GGTCCTCAAT ATTTTTTAAT TGAAAATAGA CAACCCATTG GATTTGATAA GTATTTAAGA GGTTTTGGCT TGCTTATTTA TCATGTAGAT GAAAATATGA GAAACTTTCA AAACGATAAT GAATGGTATC CAGGACTTGA TCCATCAAGG CACTATTTGG TAGCATTAGA GCAAGCCGAT GGAAAATGGG ATTTAGAAAA AAGAAGAAAT AGTGGAGATG CGGGAGATCC ATATCCGGGA AGTACTAATA ATACAACCTT TGATGAAAAT AGCACTCCCA ATAGCAATGC TTATGGAGAA ATTCCAACAG GAGTCGCAGT CAAGAATATA ACCGCCTCAG GAGAAAATAT TATATGTGAT ATTTATGTAA AATCTCTCAG TGCACCACAA ACCACATCCT TTGTAAAGCA TTTGGCATGG ACAGGAGAAA ACCCTCTCAC TATAAGACCT CTCTTCAAAT GGAAGCCTAT ACCTTACGCA GTGAATTACA CTTTGCAGGT TGCAACAGAT AGCAACTTCA ATAGTATCAT AATAAATGTA AGCACAGAAA AGAACGAATA TAGACCTACC CTTGAGGAAT TCCTTGAACC TGGCAAAACT TACTTTGCAA GGGTTAGAGC AGAAAATGCA AGTGGTGTAT CTCCATGGAC TACCATATCT TTTACCACAC CAAATACCTT TGAAGCTCTT CTTGTCTCCG ATGATGGTGG AGAGTTTGGA ATAGCCCCGT ACTTTGAAAA AGCTCTACAA GATATAAATG TATCTTACTT TATCGTGGAT GTATTTTATG ACAATGCAGT TCCACCTGCT TCTTTTATGA GCAATTTTGA TTGGGTGATT TGGGGCGGAG ATTGGGGAGC AATCTATGAT CCATCAGTTC AAAATGAGAT CATGAATTAT CTTGATAATG GTGGAAAACT CTTCATCTCA AGCCAGGATT TAGGCTGGGG ATATTCAGCA GGGTATATAA GTAGTACTTT CTATAACACT TACTTAAGAG CTGAGTTTGT ACAGGATGAT GTAGGAATCT ATTCCATAAA AGGTGCAAAC GGAAGTGAAT TTGAGAGTTT GTCCCTCTCG TTAAATACCG AGGATTCTGC TCAAAACCAA GGATATCCTG ACGAAATAGA TCCCTTAGAG GGAGCAAGAG CAATCTTAGT ATATACTCCA TCTGGAATTT CCCCCATAAC TCCAAATATT AAGCTTCCCG AAAAGATAAA AGAGCAAAAA TCCATAATTA TAAATAAAGA GATTGCATCC TCTGGGACAG CTGGAATATT CTATGCAGAT CCTACAAAAC ACTATGGAGT AGTATATTTT GCCTTTGGGC TTGAAGGACT ATCTCCCAAT ATAAGTGGAG AGGTTTTAAG CAGAGTAAGA TATGCACTAC TTTCATCTCC AGAAATTACC ACTACAGTAA CCCAAAGCTT CAACCCTAAC AACAATGAAA ATTGTAGTAT TAAGTTAACA GTAAAAGACA ATATAGGCTA TTCATATCTC ACAGTAAAAA TCTACAGCAC TTTGAATAAT CAAAAGAAAG ATCTTGTGAA GACTCTTGCA GATAATACAA AAGTTGACAA TGGTACATAT GAACTTACCT GGGATGGAAA GGACGAAAAT GGAAAAGTCA ATCCAGGAAG ATACATGGTG GAAGTCTTTG CAAAAGATGA ACTAAATAAC AGCATTACAA AAACATATTA CACCACAATT CCCTATGGGG TTCCATTATC TTTCATAGAT GTGACTAAAT TCTCAAAAGC CTTTAATCCT AACAAAGAAT TTGCACAAAT TATGTTTACT TTAACCCAAG ATGCCCATGT AAAATTCATA GTATACAGCC TTGCTGGAGT AAAACTCTAT GAAAGAGATC TTGGATATCT TCCAGCAGGA GAATACAGTA TAGTATGGGA AGGAGTCAAT CTAAAGGGCG AAATTCTGAA AAATGGGCTT TATGTATTCC AGCTTGTAGC AACATCCTCT CAAGGCGAAG CAAGAATAAA TAGATTCATA GGAATTTTGA AGTGA
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Protein sequence | MSKKLVLTLS LFILLVLIIN ISFAQVFPLT KVHIMPPHEK LIEKKVKLPK LPEITPQNIP QGTKIYGTIE KAQGIGKAIV IPVEFTDKPR QPEDIIPSNY FDILFNSVKA DWSNINPYNV GSVREFYLEN SYGQFDITAT VLPWYTAQNT YSYYINDGNN GFNGGVFVLV KEVLQHAVDI GYDLRNYDVV FVIHSGQGAE WTGYPNDIWS HASTVYVNIG GKNVPIRYSI EPEYMEDYDT QGNPVIMPQT VGVFVHEMGH SFGHLPDLYD RDYSSLGLGR WSLMAAGSWN GPQGPGGYSI GGGPSHFDAW SKIQLGWITP TVPTNDLTNV NIPPVETNPV VYKLWTDGAE GPQYFLIENR QPIGFDKYLR GFGLLIYHVD ENMRNFQNDN EWYPGLDPSR HYLVALEQAD GKWDLEKRRN SGDAGDPYPG STNNTTFDEN STPNSNAYGE IPTGVAVKNI TASGENIICD IYVKSLSAPQ TTSFVKHLAW TGENPLTIRP LFKWKPIPYA VNYTLQVATD SNFNSIIINV STEKNEYRPT LEEFLEPGKT YFARVRAENA SGVSPWTTIS FTTPNTFEAL LVSDDGGEFG IAPYFEKALQ DINVSYFIVD VFYDNAVPPA SFMSNFDWVI WGGDWGAIYD PSVQNEIMNY LDNGGKLFIS SQDLGWGYSA GYISSTFYNT YLRAEFVQDD VGIYSIKGAN GSEFESLSLS LNTEDSAQNQ GYPDEIDPLE GARAILVYTP SGISPITPNI KLPEKIKEQK SIIINKEIAS SGTAGIFYAD PTKHYGVVYF AFGLEGLSPN ISGEVLSRVR YALLSSPEIT TTVTQSFNPN NNENCSIKLT VKDNIGYSYL TVKIYSTLNN QKKDLVKTLA DNTKVDNGTY ELTWDGKDEN GKVNPGRYMV EVFAKDELNN SITKTYYTTI PYGVPLSFID VTKFSKAFNP NKEFAQIMFT LTQDAHVKFI VYSLAGVKLY ERDLGYLPAG EYSIVWEGVN LKGEILKNGL YVFQLVATSS QGEARINRFI GILK
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