| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0256 |
|---|
| Symbol | |
|---|
| ID | 7083079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 262400 |
|---|
| End bp | 264304 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643457369 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_002352196 |
|---|
| Protein GI | 217966690 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.744467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAG CGAATAACTT GGTGAGAAAC AAATTCTACA TAACAACTCC TATATATTAT
TCAAATTCTG AACCTCATAT AGGTACTGTG TATACCACTA TTGTTGCTGA TACCTTCGCC
CGTTTTTATA GACTTAAGGA TTATGACGTG TTTTTCCTTA CGGGACTTGA TGAACATGGA
CAAAAATTAG CAAGAACAGC TCAAGAAAGA GGCTATACGC CTCAAGAATA CGTAGATCTG
ATGGCACAAA AGTTCATAGA AACTTGGGAA AAAATAGGCA TAACCAATGA TGATTTTATA
AGAACCACAG AAAAAAGACA TGAAGAGGTA GTACAAAAAG TATTCCAAAA ACTATATGAT
AAAGGATATC TATATAAGGG AAGCTATGCA GGCTGGTACT GTACCCCATG TGAAACCTTC
TGGCAAAAAG AAGAGCTCCA TGATGGGAAT TGCCCTGCTT GTGGAAGACC TGTGGAGTGG
CTTGAGGAAG AAACTTATTA TTTCAAACTT TCTGCCTTTG CAGAGCCTCT CCTGAAATAT
ATTGAGGAAC ATCCTGAATT TGTATACCCT GAGACCAGAA GAAATGAAGT TATAAGCTTT
ATAAAGAGTG GATTAAAGGA TATAAGCGCT ACAAGAACTA CTGTAAAATG GGGGATTCCT
GTCCCCTTTG ATCCGAAGCA CACAGTATAT GTATGGTTTG ATGCTTTAGT AAACTACATA
AGTGCATTGG GATACTTGAC AGATGACGAC TCTAAATTTA AAAGATATTG GCCTGCAGAC
GTGCACTTAA TTGGAAAGGA TATCCTTAGA TTCCATGCCA TCATATGGCC TGCCATCCTT
ATGGCATTAA ATATTCCTTT GCCAAAGACT GTTCTTGCCC ATGGATTCTG GACTATAAAA
GGTGGTAAGA TATCTAAATC CAAAGGAAAT AGAGTAGATC CTCATGAATT GATAAATCTT
TATGGAGTAG ACGCCCTTAG GTACTTCCTT TTAAGAGAAG TTCCTTTAGG ACTTGATGGA
GAGTACAGTG ATGAAGCCTT TCATAGAAGA TATCATTCGG ATCTTGCCAA TGATTTAGGA
AACTTATTAA ATAGAGTTCT TACAGTGGCA GAAAAATATA CTGAGGGAAA AGTTCCAGAG
CCAAAAGAAT TCCAAGAGGA AGACAAATTC CTCCTTCAAA AAGGAGATGA CATGGCAAAC
AAGGTAGAAG AAGCAATGGC AAATTTCAAT CCTGCTAATG CCTTAACCTA TATCTGGGAA
GTCGTACAAG AGGCAAATAG ATACATAGAT CAACAAGCAC CTTGGAACTT AGCCTCTTCT
GGAAACAAAG ATAGATTAAA TACAGTTATT TATACCCTAT TAGAGGCTTT AAGAAAAATT
TCTATTATGC TTTATGCTTT TATGCCAAAC ATTGCAGAAG AAATCCAAAG ACAACTTGGA
TATAAAGATG TGCAATTTGC TTGGGACTTA ATAAAAGATG TTAAAATACC TGTGGGACAA
AAATTAAATA AAGGAAAGAT TTTATTCCCA AGAGTGGAAA GAAAGGAAGA AAAAGAAGTG
GAAGAAAAGA AAGAGGAGCA AAAAATAAGT ATTGATGAGT TTAAAAAGAT AGACCTTAGA
ATAGCAAAGG TAATTTCTGC GAGAAGAGTG GAAAATAGCG ACAAGTTATT ACTTCTTGAA
ATTGATCTTG GAGAGGAAAA GAGACAAATT GTGGCTGGAA TAGCAGAATA TTATAAACCC
GAGGAGCTTA TAGGCAAAGA AATAGTAGTA GTTTATAACT TACAACCTGC AAAGATAAGA
GGCTATGAAT CTCAAGGTAT GCTCCTTGCT GCCAAAGATA GCAAAGGAAG ACTTGCCATT
TTAACTCCTG AAAAAGAGGT GGATCCTGGA TCGAAGGTGA GCTAA
|
|---|
| Protein sequence | MKGANNLVRN KFYITTPIYY SNSEPHIGTV YTTIVADTFA RFYRLKDYDV FFLTGLDEHG
QKLARTAQER GYTPQEYVDL MAQKFIETWE KIGITNDDFI RTTEKRHEEV VQKVFQKLYD
KGYLYKGSYA GWYCTPCETF WQKEELHDGN CPACGRPVEW LEEETYYFKL SAFAEPLLKY
IEEHPEFVYP ETRRNEVISF IKSGLKDISA TRTTVKWGIP VPFDPKHTVY VWFDALVNYI
SALGYLTDDD SKFKRYWPAD VHLIGKDILR FHAIIWPAIL MALNIPLPKT VLAHGFWTIK
GGKISKSKGN RVDPHELINL YGVDALRYFL LREVPLGLDG EYSDEAFHRR YHSDLANDLG
NLLNRVLTVA EKYTEGKVPE PKEFQEEDKF LLQKGDDMAN KVEEAMANFN PANALTYIWE
VVQEANRYID QQAPWNLASS GNKDRLNTVI YTLLEALRKI SIMLYAFMPN IAEEIQRQLG
YKDVQFAWDL IKDVKIPVGQ KLNKGKILFP RVERKEEKEV EEKKEEQKIS IDEFKKIDLR
IAKVISARRV ENSDKLLLLE IDLGEEKRQI VAGIAEYYKP EELIGKEIVV VYNLQPAKIR
GYESQGMLLA AKDSKGRLAI LTPEKEVDPG SKVS
|
|---|
| |