Gene Dtur_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0078 
Symbol 
ID7082345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp76579 
End bp78003 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content36% 
IMG OID643457203 
Productnickel-dependent hydrogenase large subunit 
Protein accessionYP_002352030 
Protein GI217966524 
COG category[C] Energy production and conversion 
COG ID[COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA AGATTACTAT AAGTCCAGTT ACAAGAATAG AAGGACATGC AAGGGTTACT 
ATTCATCTTA ATGATGACGG AAAAGTAGAA AGTGCTTTCT TCCATGTAGA TCAATTTAGA
GGATTTGAAA AATTCTCAGA AGGAAGGCAC TTTTCAGAAA TGCCTGTTAT TACTGAAAGA
ATCTGCGGTA TATGTCCTAT AAGTCACCAC TTAGCCTCTG CAAAGGCCAC CGATGAGATC
ATAGGCGTAG AAATCCCAAG AACCGCTAAA CTTCTAAGAG AACTCATTCA CATGGGACAG
ATTATTCAGT CCCATTCCAT GCACTTTTTT GAATTAGCAG GACCAGACCT TATTTTAGGT
TGGGATGCAG ATCCAAAGAT CAGAAATGTG GTAGGATTAA TTCAGGAAAA TCCAGAACTT
GCACTAAAAG CAGTAAAATT AAGAAAATTT GGACAAAGAA TTATTGAACT TGTAGCAGGA
AGAAGAATAC ATCCTACCTT TGCAGTTCCA GGAGGAGTTA ATTCTTCTTT ATCTCCCTCT
GCAAGAGACG AAATTTTAAG TGGAATTGAT GAAATGATTG GATACATTAA AGAGGGAATA
AAAATAGCTG AAGACTTCAT AGAAAAGAAT AAAGAACTCT GCGACGAATT TGCTTCCTTT
CCCACAGGTT ATATGGGACT TGTAAAAGAA GATGGTTCTC TTGAGCTTTA TGATGGAAAA
ATAAGATTTA TGGATAAAGA TGGAAATATA CTTAAAGAGT TTAAGCCTCA ATATTATTTG
CGATATATTG GAGAAAGGGT TGAAGATTGG ACCTATTTAA AATTCCCATA TTATAAACCC
TTAGGATATC CTAACGGAGT TTATAGAGTA GGTCCTTTAG CAAGATTAAA CATAGCTGAC
AAAATTAGCA CACCTCTTGC CAATGAAGAA TTCAAGAAAT TTAAATCCAT TAATAATGGA
AAACCAGTAG AAGGTTCCAT ATACTACCAT TATGCAAGAC TTATTGAAAC TGTCTATGCC
CTTGAAAGAG CAAGAGAAAT CTTAGAAGAT CCTGAGGTAA TGAGCCAGAA TGTATTAAAG
ATGGGAGAGG TGACTAATGA AGAAGGGGTA GGAGTAGTAG AAGCTCCAAG AGGAACCTTA
ATCCACCATT ACTGGGTAGA TGAAAGGGGA ACCATTGAGA AGGTGAATTT GATTGTATCC
ACAGGACATA ATAATTGGGC TATGAGTAAA GCAGTAGAGA TGGTAGCAAA AGCCTTTGTG
GATGGTAAAA ATCTTAAAGA AGGTATGCTT AATAGGGTTG AGGGGGCTAT TAGATGTTAT
GATCCTTGTC TTTCTTGTTC TACTCATGCT ATAGGAAAGA TGCCCATTGT AGTTGAACTA
TACGACAAAG ACGGAAACAT CATTGATGTT ATAAAGAGAG ATTGA
 
Protein sequence
MEKKITISPV TRIEGHARVT IHLNDDGKVE SAFFHVDQFR GFEKFSEGRH FSEMPVITER 
ICGICPISHH LASAKATDEI IGVEIPRTAK LLRELIHMGQ IIQSHSMHFF ELAGPDLILG
WDADPKIRNV VGLIQENPEL ALKAVKLRKF GQRIIELVAG RRIHPTFAVP GGVNSSLSPS
ARDEILSGID EMIGYIKEGI KIAEDFIEKN KELCDEFASF PTGYMGLVKE DGSLELYDGK
IRFMDKDGNI LKEFKPQYYL RYIGERVEDW TYLKFPYYKP LGYPNGVYRV GPLARLNIAD
KISTPLANEE FKKFKSINNG KPVEGSIYYH YARLIETVYA LERAREILED PEVMSQNVLK
MGEVTNEEGV GVVEAPRGTL IHHYWVDERG TIEKVNLIVS TGHNNWAMSK AVEMVAKAFV
DGKNLKEGML NRVEGAIRCY DPCLSCSTHA IGKMPIVVEL YDKDGNIIDV IKRD