Gene BCAH187_A5527 details

Gene Information

• Locus tag: BCAH187_A5527
• ID: 7073597
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus AH187
• Kingdom: Bacteria
• Replicon accession: NC_011658
• Strand: +
• Start bp: 5112994
• End bp: 5114808
• Gene Length: 1815 bp
• Protein Length: 604 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 643453923
• Product: sensory box/GGDEF family protein
• Protein accession: YP_002341416
• Protein GI: 217962838
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 64
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGATCG GTCTAGTATT ATCTCTTATC TTATTATTCT TACGACAACT TTATATGTGG 
AAAGATAATC AGGCACTAAT CGATACATAC GAGCAGTTGA CTACACAACT AGAAGATAAA 
GTAGAAGAAG GTGCATCTGC TTTATCAAAA AGTGAACAAC GTTATAAATC TTTATTCGAA 
GATCACCCGG ATGCTGTTTT CTCTTTAAAT ATGTATGGTA TTTTCCAGCA GTCTAATACA 
GCTTGCGAAA GCTTATTTAC TGCCTACTAT TGTGAAGTAG AAAGCTATTC TCTTTTACAC 
TTTATTGACC CAAAAGACCA TGATTTACTG CAGAAAGCTT TACAACTAAC GAAAGAAGGT 
AGACCACAAA CTTTAGAAGT TCGTACAAAA GAAAAGGAAG GTTATTACTA TTACCTTCAC 
ATTACACTCA TCCCTACTTT CATAAACAAA GAAGTTGTTG GGATGTTCGG TATAGCACGT 
GATATTACAA CTTTATATGA AAAACAAAAA CAAGTAGAAC ATTTAGCCTT TCATGATGCA 
CTTACCGGAT TACCAAATCG CCGTAAGTTT GAAAAAGATT TAAAAAACAT TTTAAATACC 
GCTCAGGCTA GCGCAAATGA TGTTGCCGTC ATGTTTCTTG ATTTAGATCG ATTCAAAAAA 
ATTAACGATA GACTCGGTCA TGGCGTCGGA GACTTGTTAT TAATTGAAGT AGCAAAACGA 
TTACGCAGTT GCCTACGTTC AAAAGATGTC GTTGCTCGCC AAGGCGGAGA TGAGTTTACA 
ATTCTATTAC CAGATATGTA CTCAGAAAAA AGTGCGGCCT TTATAGCTGA ACAGATTTTA 
AATATTTTAA ACAAACCATT CTTCATTAAA GATGAAGAAC TGTCTATTAC ACCAAGTATC 
GGAATTGCAA TGTACCCTGA TTGTGGAACT GATGTAACAG CATTAATGAA AAATGCTGAT 
ATGGCTATGT ATCGCGCGAA AGCAAATGGA AAAAACCGAT TTGTTTTCTT CTCAAAAGAA 
ATGAGTATCG CTCAAAATGA GAGTAACTTC TTAGAAGGAG AACTTTCAAA AGCATTACAA 
CAAAATGAAT TTTTCCTTGA ATACCAGCCA CAAGTAAGCA CAAAAACAAA ACAAGTTATT 
GGTTTTGAAG CATTAATTCG TTGGAAACAT CCAAAGCTCG GTATCGTATC CCCAGCCCAA 
TTTATCCCTC TAGCAGAGGA AACTGGATTC ATTATTGAAC TTGGAAATTG GATTTTACGT 
ACTGCTTGCT TAGAAGCGAA AAGATGGCAT AATCAAGGTT TCTCTCACTT AAAAGTCGGT 
GTAAATTTAT CTGTAGTTCA ATTTAATCAT GCAGATTTAA TCCCAACTAT TTCAAAAGTT 
TTAGAAGAAA CAGAGTTAAA ACCAGAAGCA CTAGATATCG AAATTACAGA AAGTATCGCC 
ATTAACCAAA ATCAATCTGT AGTTGCAAAA CTAGAACAAC TTCAAAATCT CGGTATTCAA 
ATTTCAATTG ATGACTTTGG AACTGGTTAT AGTTCTTTAG CTTATTTAAC AAAATATCCA 
ATTAATACAT TAAAAATTGC TCGAGAATTT ATTTGCGGAA TTACAACTAG TCCTTTAGAG 
GAAGCGATTA TTTCTTCCAT TATTACACTA TCAAAAGAAC TAAATTTAGA AGTTATCGCA 
GAAGGTGTAG AAACCGAAGA ACAATGGAAG TTTTTATATG AGCAAAACTG TGACCACATT 
CAAGGATTCT TTATTAGCAA GCCCGTTTCT AGTAAAGACG TTTGGAGGTT ACTCCACAAA 
AAAACAACCG TCTAA 

 

Protein sequence

MLIGLVLSLI LLFLRQLYMW KDNQALIDTY EQLTTQLEDK VEEGASALSK SEQRYKSLFE 
DHPDAVFSLN MYGIFQQSNT ACESLFTAYY CEVESYSLLH FIDPKDHDLL QKALQLTKEG 
RPQTLEVRTK EKEGYYYYLH ITLIPTFINK EVVGMFGIAR DITTLYEKQK QVEHLAFHDA 
LTGLPNRRKF EKDLKNILNT AQASANDVAV MFLDLDRFKK INDRLGHGVG DLLLIEVAKR 
LRSCLRSKDV VARQGGDEFT ILLPDMYSEK SAAFIAEQIL NILNKPFFIK DEELSITPSI 
GIAMYPDCGT DVTALMKNAD MAMYRAKANG KNRFVFFSKE MSIAQNESNF LEGELSKALQ 
QNEFFLEYQP QVSTKTKQVI GFEALIRWKH PKLGIVSPAQ FIPLAEETGF IIELGNWILR 
TACLEAKRWH NQGFSHLKVG VNLSVVQFNH ADLIPTISKV LEETELKPEA LDIEITESIA 
INQNQSVVAK LEQLQNLGIQ ISIDDFGTGY SSLAYLTKYP INTLKIAREF ICGITTSPLE 
EAIISSIITL SKELNLEVIA EGVETEEQWK FLYEQNCDHI QGFFISKPVS SKDVWRLLHK 
KTTV