| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A5477 |
|---|
| Symbol | |
|---|
| ID | 7074603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | + |
|---|
| Start bp | 5066660 |
|---|
| End bp | 5069389 |
|---|
| Gene Length | 2730 bp |
|---|
| Protein Length | 909 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643453875 |
|---|
| Product | sensory box/GGDEF family protein |
|---|
| Protein accession | YP_002341366 |
|---|
| Protein GI | 217962790 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC AAACACATGT AAGCATTCTT ATAAGCATTA TATTGTTATC TATAATGATT
CATTACGTAA CAATGCCTTT TCTATATGAA TACTCATTTC CTTTTCAAAT ATTAATTGGT
ATGAGTACAT TATTCATTGA TATTATCGCT TGTAGTTATA TACTTTATTT TTCAAACTTG
AAAGAAGGGT TACCTCGTTT ATTTTGGACC ATTTTATGTG TTGGAACCCT CTCTTATTTC
ATTGGTGATA TCGTCGTTGC CTATCAACGT TTAATTTTAA AGGACTACTA TACATTCGTT
GATCCGTCTG ATTTTTTTTA TCTACTTTTT TTAATTAGCT TTGCATTTGC CTTTCTATAT
GAAATCATTT ATAACCGAGA TTTATTAGAA AAGCTTTTTA TGATATGTGA TATTTGTATT
ATTGTTACAG CACAGTTCAC TTTAAGTTAC TACTTACTTA TTGAACGAAC CATTCACGTT
TCTTCAACAT CCTATATCGA CATATTTGTT CAACTTACCT ATCCAATGAC CGATTTACTC
TTTTTTCTCA TAGGAATTAA CCTTTTATTC AAACCACTTT CCTTATTACC GAAAAAAGTT
GGTGCGCTCC TTGGTAGTGC TTTAATTTTG TATGCGACTA CAGATGCGAT TTATGCTTAT
ATCAAATACT TCACACCCGA ATATTCTATG TTTACAATTA CTCCTCTCTA TCAAGTAACT
TTAGTGCTAG TAGCAATTGC CTGTATTCTT CATACAAAAG AACCTGAAAG ACAAGAACAA
GTGCTATTAA CACCTAAACT TGGGGAATCA ATCCGATTAT CGTTACCTTA TATTTCTGTC
GTAATGCTTA TTGTTTTCAT ATTAGTCGAA TACGTTTTTG CGCCTATTGT AGTAATCGGG
CTTATGATAA CTTTCTCCTT CGTTCTCATT CGCCATAGTT TAGTTCGAAA GCAAAATAAA
ATATTATTAT TAGCCCAAAT GCAATTCAAC TCAGAACTTG AAAAACAAAT TGAACTGCGT
ACAGAAGATT TAGTAGAACA AAAAAATGAA CTATATCATA ACCAACAAAT GTTTAAATCT
TTATACGAGC ATCATCCAGA TCCAATCTTC ACATTAGATT TATACGGTAA TTTTCTTAAA
GTGAATAACG CTGGTACGAC TTTACTCGGT TATCAAACGA ATGAATTATT AAATCAGCCT
TACTATTCAC TTACGTATGA AGAAGATTTG GAAGAAATCA TTAATGCCTT TCATCGCGTA
AAAAAGGGGA AATCTATTTC TTTAGAAATA CGGGCATATC ATAAAAATAG AGATATTTAC
TACTTGCATG TGACAGCTGT TCCTATCTTT TTAAAGGATC ATATTTCTGG AGTGTATTTA
ATGATTAAAG ATATTACGGA AAGCAAACAA CAACAAGAAC AAATTAACTT TCTAGCCTAT
CATGATACAC TAACAGAGCT TGCAAATCGA CGTGCATTTC ATCAATATGT AGAACAAGCA
ATTGCGCGAT CCAAAATATC AAAAATGCCT TTTGCTGTTA TGTTTCTTGA CCTAGATCGC
TTTAAAGTTA TTAACGATAC CCTCGGTCAT AGGGTAGGAG ACCTTCTATT AATTGCAGTA
GCAAAAAGAC TCGAAAGTAT AGCGACACCA AATATGAAGC TTGCCCGATT AGCTGGAGAT
GAGTTCACAA TCCTAATCGA AAATTATAAA AAGAGGCCAG ATGTAAAAAA AATAGCTGAT
ACAATTGTAG CAGCCATGAA CGAACCATTC GAAATTGAAA ATCAACATTT ACAAATCTCA
CCGAGCATCG GGATAGCCAT ATACCCTGAA GCAGGTGAAG ATCCATTATC GATTTTACAG
CATGCTGATA TGGCCATGTA CGAAGCAAAA AATAAAGGGA AAAATGGTAG CTCTCTGTAC
ACGAAAGAAT TGTATAAAAA AATGGAAAGA AAAGCTCGAA TTGAAAAAGA TTTACCACTC
GCTTTAGTAA ACGAAGAATT TTATCTTGTC TATCAACCAC AAATTGATAT TACTACGAAA
AAGATTATTG GTGCTGAAGC ATTACTACGC TGGAAACACC CACTCCTTGG TGACATTCCG
CCATGTGAGT TCATTCCAAT TGTAGAGGAG ACTCCTCAAG TCATTCCACT TGGTCATTGG
GTATTAAATG AATCTTGTCG TCAGCTAAAA ATATGGCATA CTTTTGGCTA CAAAGATTTA
AAAATAAGTG TTAACTTATC AGCTAAAGAG TTCCAGCAAA ATAATTTAAT CGAGAACATT
TTACAAATAA TAACAGACGT TAAAGTCGAT CCAAAAGATG TAACACTTGA ATTAACAGAA
CGAATTGCAA TGATCGATGA AAAGGAAACG TTATCAAAGC TAAAACAATT AAAGGAATAT
GGTATTCAAA CGTCCATCGA TGACTTCGGA ACCGGCTATT CTTCTCTTGC TTATTTATCC
ATTTTCCCTA TTGATACATT AAAAGTACCG AGAGAATTTA CACAACTCGC CGATCATCGC
CCTGAAGAAA GGGCCATCGT TTCCACTATC CTTTCTCTTG CAAATACGTT AAACCTATCT
GTCGTTGCTG AAGGAATTGA AACAGAAAAA CAACTTAAGT TTCTACAAAA GAACAACTGT
AAATATATGC AAGGTTACTA TTTCAGTAAA CCACTTACTA GTCATCAATT TATAAAATTT
CTACAAAAAA CACCTAGTAT GAACCAATAA
|
|---|
| Protein sequence | MKKQTHVSIL ISIILLSIMI HYVTMPFLYE YSFPFQILIG MSTLFIDIIA CSYILYFSNL
KEGLPRLFWT ILCVGTLSYF IGDIVVAYQR LILKDYYTFV DPSDFFYLLF LISFAFAFLY
EIIYNRDLLE KLFMICDICI IVTAQFTLSY YLLIERTIHV SSTSYIDIFV QLTYPMTDLL
FFLIGINLLF KPLSLLPKKV GALLGSALIL YATTDAIYAY IKYFTPEYSM FTITPLYQVT
LVLVAIACIL HTKEPERQEQ VLLTPKLGES IRLSLPYISV VMLIVFILVE YVFAPIVVIG
LMITFSFVLI RHSLVRKQNK ILLLAQMQFN SELEKQIELR TEDLVEQKNE LYHNQQMFKS
LYEHHPDPIF TLDLYGNFLK VNNAGTTLLG YQTNELLNQP YYSLTYEEDL EEIINAFHRV
KKGKSISLEI RAYHKNRDIY YLHVTAVPIF LKDHISGVYL MIKDITESKQ QQEQINFLAY
HDTLTELANR RAFHQYVEQA IARSKISKMP FAVMFLDLDR FKVINDTLGH RVGDLLLIAV
AKRLESIATP NMKLARLAGD EFTILIENYK KRPDVKKIAD TIVAAMNEPF EIENQHLQIS
PSIGIAIYPE AGEDPLSILQ HADMAMYEAK NKGKNGSSLY TKELYKKMER KARIEKDLPL
ALVNEEFYLV YQPQIDITTK KIIGAEALLR WKHPLLGDIP PCEFIPIVEE TPQVIPLGHW
VLNESCRQLK IWHTFGYKDL KISVNLSAKE FQQNNLIENI LQIITDVKVD PKDVTLELTE
RIAMIDEKET LSKLKQLKEY GIQTSIDDFG TGYSSLAYLS IFPIDTLKVP REFTQLADHR
PEERAIVSTI LSLANTLNLS VVAEGIETEK QLKFLQKNNC KYMQGYYFSK PLTSHQFIKF
LQKTPSMNQ
|
|---|
| |