| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A5364 |
|---|
| Symbol | |
|---|
| ID | 7073505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | + |
|---|
| Start bp | 4944467 |
|---|
| End bp | 4945600 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643453765 |
|---|
| Product | transcription antiterminator, LytR family |
|---|
| Protein accession | YP_002341254 |
|---|
| Protein GI | 217962680 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1316] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAC GTTATTATCA TCTCCAAAAT AGCAGAATAA AAAAGAAACG AAGAAGAAAG
TTTTTCTACT TCCTTATTTT CTTATTTTTA TTTGGCAGTG TAGGACTTTA TATATTAAAT
TCCTACTCTT CTCTCATGGG GATGTATAGT GGTTTTACTC GTGAAAAATC GGATTTAAGA
ACCGAAGATG TAGAAATTAC AAAGGAGCCT TTTACACTCC TTATTATGGG TATAGAAGAT
TATGCAACAG ACGGTCAAAA CGGTCGTACA GATTCATTAA TGTTTGCGAC AGTCAATCCG
AAAACGCAAA AGATTTCGCT TATGAGTATC CCTCGTGATA GTCGCGTTCC AATTGTCGGA
AAGAATAAAG AGGACAAAAT TAACGCTGCG CATGCTTACG GCGGAGAAGA AATGGCAATC
AAAACTGTCG AAGGTTTTCT AAAAGTGCCT GTCGATCATT ATCTTAAAAT TGATTTCCAA
GGCTTTAAAG GTATTGTTGA TGCTGTTGGC GGTGTTACTG TTGATGTCCC CTTCGATTTT
TGGGAGCGTT CAGACGTGGA TTACTACAAA AAAATCGAAT TTAAGCAGGG ACAACAAGAA
TTAAATGGTG AAGAAGCACT CGCTTACGTT CGTATGCGAA AGCAAGATCC GAATGGCGAC
TATGGCCGGG CTGCTAGACA AAGACAATTA CTAGCTGCTG TTGTTCAAAA ACTAAATTCC
ACCTCTACCG TATTTAAAAT TAAAGATTTG ACAGCAGTCG TTGGAAAATA TATAAAAACT
GACATTCCTA TTTCTGATGG CCTTGCTCTT TACAAGAAAC TTTCTGGGTT TGATCCTTCC
ACAATACAAA CACTCAAACT TGAAGGAGAA GACAAAAAAA TAGGTGGTAT TTATTACTTC
CTTCCAGATC CAAACGGTGT TGAGGCAGTA CGTAACGAAA TTAAAAAAGA ACTAGGAGAA
AAGGTAACCA CGCAAGAAAA TTCAACAACA AAAACGGAAT CCACTCCTTC TTCAAATTCG
AACTCTAACG AGAAAGCGAA GAAAGAAACG AATCAGAATC AGAACAAAAC ACCAACTGAT
CCCCCTCCTT CTACGAATGC TCATGCAGAG TGGATTATGA GAAATCAGCA ATAA
|
|---|
| Protein sequence | MEERYYHLQN SRIKKKRRRK FFYFLIFLFL FGSVGLYILN SYSSLMGMYS GFTREKSDLR
TEDVEITKEP FTLLIMGIED YATDGQNGRT DSLMFATVNP KTQKISLMSI PRDSRVPIVG
KNKEDKINAA HAYGGEEMAI KTVEGFLKVP VDHYLKIDFQ GFKGIVDAVG GVTVDVPFDF
WERSDVDYYK KIEFKQGQQE LNGEEALAYV RMRKQDPNGD YGRAARQRQL LAAVVQKLNS
TSTVFKIKDL TAVVGKYIKT DIPISDGLAL YKKLSGFDPS TIQTLKLEGE DKKIGGIYYF
LPDPNGVEAV RNEIKKELGE KVTTQENSTT KTESTPSSNS NSNEKAKKET NQNQNKTPTD
PPPSTNAHAE WIMRNQQ
|
|---|
| |