| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A5278 |
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| Symbol | vacB |
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| ID | 7077556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus AH187 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011658 |
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| Strand | - |
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| Start bp | 4866184 |
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| End bp | 4868604 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643453682 |
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| Product | ribonuclease R |
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| Protein accession | YP_002341170 |
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| Protein GI | 217962598 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000124073 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAGAAA TCATACAAGA ACATATTGAT AAGTTGTTAT TATTTATGAG AGAAGAAGCG
TATAAACCGC TAACGATACA AGAGTTAGAA GAGGCATTTG GAATTGAAGG TTCTGAGGGC
TTTAAAGATT TTGTAAAGGC GCTTGTAACG ATGGAAGAAA AGGGACTTGT TATTCGTACT
CGTAGCAACC GTTACGGTCT TCCTGAAAAG ATGAATTTAA TACGTGGTAA GTTAATTGGA
CATGCGCGTG GTTTTGCATT TGTTGTACCA GACGAGAAGA AAACAGGAGA CGATGATCTT
TTCATCCCGC CTACAGAATT AAACGGTGCA CTTCACGGCG ATACAGTATT AGCACGCCTT
AGTTCCCAAT CGAGTGGTTC GCGTCAAGAA GGTTCCATTG TACGCATTTT AGAACGCGGA
ACGAAAGAGT TAGTTGGTAC ATATACAGAA TCGAAAAACT TTGGATTTGT TATACCTGAC
AATAAACGCT GGACAAGTGA CATTTTCGTA TTGAAAAGCG CATCAATGGG TGCTGTAGAA
GGTCATAAAG TAGTTGTGAA AATTACGAGC TATCCAGAGA ATCGTTTAAG TGCAGAAGGT
GAAGTTATTC AAATTCTAGG TCATAAAAAT GATCCAGGAG TAGATATTTT ATCTGTTATC
CATAAACATC ATTTGCCTTT AGCGTTCCCT GAAGAAGTGA TGGAGCACGC AAACAGTGTA
CCAGAAACGA TTTCAGAAGA AGATTTAAAA GATCGCCGTG ACCTACGTGA CCAAATGATC
GTAACGATTG ACGGTGCAGA CGCAAAAGAT TTAGATGACG CTGTTACAGT AACGAAACTT
GAGAACGGTA ACTACAAGCT TGGTGTTCAC ATTGCGGACG TAAGTCATTA CGTTCAAGAA
GGTTCTCCAA TTGATGTAGA AGCAGCGGAA AGAGCGACGA GTGTATATCT TGTTGACCGT
GTAATTCCGA TGATTCCGCA TCGTCTATCT AACGGTATTT GTTCATTAAA TCCGAAAGTA
GACCGTCTGA CGTTATCTTG TGAAATGGAA ATCAATAATT TAGGTGACGT TGTTAAACAC
GAGATTTTCC AAAGTGTAAT TAAAACGACA GAGCGTATGA CGTATGCTGA CGTAAGAAGC
ATTTTAGAAG ATGAGGACGA AGAATTAAAT AAACGCTATG AGCCGCTCGT ACCGATGTTT
AAAGAGATGG GCCAATTGGC ACAAATTTTA CGTGAAAAAC GTATGCGCCG CGGGGCAATC
GACTTTGACT TTAAAGAAGC GAAAGTATTA GTAGATGAAG AAGGAAAACC GACAGACGTT
GTTATGCGTG ATCGTTCTGT ATCAGAGAAG TTAATTGAAG AATTTATGCT TGTCGCGAAC
GAAACAGTAG CAGAGCATTT CCACTGGATG AACGTACCAT TCATGTACCG TGTCCATGAA
GATCCGAAAG AAGATAAGTT AGAGCGTTTC TTCGAGTTTG TAACGAACTT CGGATATGCA
GTAAAAGGAC GTGCAAATGA AGTACACCCT CGTGCGCTAC AACAAATTCT TGAAATGGTT
CAAGGGCAAC CAGAAGAAGT AGTCATTTCG ACAGTAATGC TTCGTTCTAT GAAGCAAGCA
CGTTACGATG CAGAAAGCTT AGGACATTTC GGTTTATCAA CTGAGTTCTA CACACATTTC
ACATCACCAA TTCGTCGTTA CCCAGATACG ATTGTTCATC GATTAATTCG TGAATACATC
ATTAACGGTA AAGTCGACAA TGAAACACAA GCAAAATGGC GTGAAAAATT ACCTGAGATT
GCAGAGCACT CTTCTAATAT GGAGCGTCGT GCAGTTGAAG CAGAACGTGA AACAGACGAG
CTGAAAAAAG CAGAATATAT GCTTGATAAG ATCGGCGAAG AGTATGACGG TATGATTAGC
TCTGTAACAA ACTTCGGTTT ATTCGTAGAG CTTCCAAATA CAATTGAAGG TCTTGTACAC
GTTAGCTACT TAACGGATGA TTACTACCGT TATGATGAGC AGCATTTCGC AATGATCGGA
GAACGTACAG GTAACGTATT CCGCATCGGT GACGAAATTA CAATTCGCGT TATTAACGTA
AACAAAGACG AGCGTGCAAT CGACTTTGAA ATCGTTGGCA TGAAAGGTAC GCCTCGTCGT
AAGTTCAAAG ACCGCCCAGT CGTTATCGAA CAGCCAAGAA CAGGCAGAAA GAAACGCGGC
GGACGTAGCG AACGCAGTAA TGAGCGCGGC GGAGAACGTG GCACAGGTAG AAAATTTGAC
CGTGGTGGCA AAGGTAAAGG AAGAGGATCT GCATCCGCGT CCGCTAGCCA ACCAGGGAAA
AAAGATGGTA ACGGCAAGAA GAAAAAAGCA TTCTTCGAAA ACGTACCAGG ATTCAAGAAG
AAGAAGAAAA AGCGTAAGTA A
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| Protein sequence | MEEIIQEHID KLLLFMREEA YKPLTIQELE EAFGIEGSEG FKDFVKALVT MEEKGLVIRT
RSNRYGLPEK MNLIRGKLIG HARGFAFVVP DEKKTGDDDL FIPPTELNGA LHGDTVLARL
SSQSSGSRQE GSIVRILERG TKELVGTYTE SKNFGFVIPD NKRWTSDIFV LKSASMGAVE
GHKVVVKITS YPENRLSAEG EVIQILGHKN DPGVDILSVI HKHHLPLAFP EEVMEHANSV
PETISEEDLK DRRDLRDQMI VTIDGADAKD LDDAVTVTKL ENGNYKLGVH IADVSHYVQE
GSPIDVEAAE RATSVYLVDR VIPMIPHRLS NGICSLNPKV DRLTLSCEME INNLGDVVKH
EIFQSVIKTT ERMTYADVRS ILEDEDEELN KRYEPLVPMF KEMGQLAQIL REKRMRRGAI
DFDFKEAKVL VDEEGKPTDV VMRDRSVSEK LIEEFMLVAN ETVAEHFHWM NVPFMYRVHE
DPKEDKLERF FEFVTNFGYA VKGRANEVHP RALQQILEMV QGQPEEVVIS TVMLRSMKQA
RYDAESLGHF GLSTEFYTHF TSPIRRYPDT IVHRLIREYI INGKVDNETQ AKWREKLPEI
AEHSSNMERR AVEAERETDE LKKAEYMLDK IGEEYDGMIS SVTNFGLFVE LPNTIEGLVH
VSYLTDDYYR YDEQHFAMIG ERTGNVFRIG DEITIRVINV NKDERAIDFE IVGMKGTPRR
KFKDRPVVIE QPRTGRKKRG GRSERSNERG GERGTGRKFD RGGKGKGRGS ASASASQPGK
KDGNGKKKKA FFENVPGFKK KKKKRK
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