Gene BCAH187_A4790 details

Gene Information

• Locus tag: BCAH187_A4790
• Symbol: rpsD
• ID: 7075785
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus AH187
• Kingdom: Bacteria
• Replicon accession: NC_011658
• Strand: +
• Start bp: 4443281
• End bp: 4443883
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 643453202
• Product: 30S ribosomal protein S4
• Protein accession: YP_002340713
• Protein GI: 217962143
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000781758
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGTT ATACAGGTCC AGCTTGGAAA CTGTCTCGTC GTCTTGGAAT CTCTCTAAGC 
GGCACAGGAA AAGAATTAGA AAAACGCCCT TACGCACCAG GTCCTCACGG TCCTAACCAA 
CGTAAGAAAC TTTCAGAATA CGGTTTACAA TTACAAGAGA AACAAAAACT TCGTCACATG 
TACGGCATGA CTGAGCGTCA ATTCCGTCGC ACATTTGACC AAGCAGGTAA AATGCCTGGT 
AAGCACGGCG AAAACTTCAT GATCCTTCTT GAAGCTCGTC TTGACAACTT AGTTTACCGT 
ATGGGCTTAG CTCGCACTCG TCGTGCAGCT CGCCAATTAG TAAACCACGG TCACATCATG 
GTTGATGGCG CTCGCGTAGA TATCCCATCT TACCGTGTAA AACCTGGTCA AACTATCAGC 
GTTCGCGAAA AATCTAGCAA CCTTGTTGTT GTTAAAGAAG CGATCGAAGT TAACAACTTC 
GTACCAGAAT ACTTAACTTT CGATGCTGAC AAATTAGAAG CTACTTACAC TCGTCACGCT 
GAGCGTGCTG AGTTACCAGC TGAAATCAAC GAAGCATTAA TCGTAGAGTT CTACTCTCGT 
TAA 

 

Protein sequence

MARYTGPAWK LSRRLGISLS GTGKELEKRP YAPGPHGPNQ RKKLSEYGLQ LQEKQKLRHM 
YGMTERQFRR TFDQAGKMPG KHGENFMILL EARLDNLVYR MGLARTRRAA RQLVNHGHIM 
VDGARVDIPS YRVKPGQTIS VREKSSNLVV VKEAIEVNNF VPEYLTFDAD KLEATYTRHA 
ERAELPAEIN EALIVEFYSR