Gene BCAH187_A4426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCAH187_A4426 
SymbolsigA 
ID7076571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus AH187 
KingdomBacteria 
Replicon accessionNC_011658 
Strand
Start bp4100984 
End bp4102111 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content40% 
IMG OID643452841 
ProductRNA polymerase sigma factor RpoD 
Protein accessionYP_002340353 
Protein GI217961783 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000104378 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACA AACCAGCTCG TTCTAAACAA ATTGAAACTG AAATGACCCT TGAGCAAGTG 
AAAGAACAAC TCACTGAGCT CGGAAAAAAA CGTGGCGTTC TTACATATGA AGAGATTGCA
GAACGCATGA ATGGATTTGA AATTGAATCC GATCAAATGG ATGAATACTA TGAATATTTA
GGTGAACAAG GGATTGACTT AGTTGGCGAC AATGACAACG ACGAAGGCCC TAATAATCGC
CAAATAGCAA AATCGGAAGA AGAATTCGAC CTCAATGATT TAAGTGTACC ACCAGGGGTT
AAAATCAACG ATCCTGTTCG TATGTATTTA AAAGAAATTG GTCGTGTAGA TTTACTATCT
GCAGAAGAAG AAATTCGACT TGCAACGCGT ATTGAAGAAG GCGATGAAGA AGCGAAACGT
CGTCTTGCAG AAGCAAACTT ACGTCTTGTA GTAAGTATTG CAAAGCGCTA CGTGGGCCGT
GGTATGCTTT TCTTAGACTT AATCCAAGAA GGGAATATGG GTCTAATTAA AGCGGTTGAA
AAGTTCGATT ATCGTAAAGG TTTCAAATTT AGTACGTATG CAACTTGGTG GATTCGCCAA
GCAATTACAC GTGCGATTGC AGACCAAGCA AGAACAATTC GTATCCCAGT TCATATGGTT
GAAACGATTA ATAAGTTAAT TCGTGTACAA CGTCAATTAT TACAAGATTT AGGACGTGAA
CCATCTCCTG AAGAGATTGG TGAAGAAATG GATCTTGCTC CAGAAAAAGT ACGTGAAATC
TTGAAAATTG CACAGGAGCC AGTTTCTCTT GAAACACCGA TTGGTGAAGA AGATGACTCC
CATTTAGGTG ATTTCATTGA AGACCAAGAA GCAACATCGC CTGCGGACCA TGCAGCGTAT
GAATTGCTAA AAGAACAATT AGAAGATGTG TTAGATACAC TAACAGATCG TGAAGAAAAT
GTTCTACGTC TTCGTTTTGG TTTAGATGAT GGACGAACTC GTACGCTTGA AGAAGTTGGG
AAAGTATTCG GCGTAACGAG AGAACGTATC CGTCAAATTG AAGCAAAAGC ACTTCGTAAA
TTGAGACATC CAAGCCGTAG TAAGCGTCTT AAGGATTTCT TAGAATAG
 
Protein sequence
MADKPARSKQ IETEMTLEQV KEQLTELGKK RGVLTYEEIA ERMNGFEIES DQMDEYYEYL 
GEQGIDLVGD NDNDEGPNNR QIAKSEEEFD LNDLSVPPGV KINDPVRMYL KEIGRVDLLS
AEEEIRLATR IEEGDEEAKR RLAEANLRLV VSIAKRYVGR GMLFLDLIQE GNMGLIKAVE
KFDYRKGFKF STYATWWIRQ AITRAIADQA RTIRIPVHMV ETINKLIRVQ RQLLQDLGRE
PSPEEIGEEM DLAPEKVREI LKIAQEPVSL ETPIGEEDDS HLGDFIEDQE ATSPADHAAY
ELLKEQLEDV LDTLTDREEN VLRLRFGLDD GRTRTLEEVG KVFGVTRERI RQIEAKALRK
LRHPSRSKRL KDFLE