Gene BCAH187_A4307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCAH187_A4307 
Symboldxs 
ID7075698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus AH187 
KingdomBacteria 
Replicon accessionNC_011658 
Strand
Start bp4006976 
End bp4008868 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content39% 
IMG OID643452724 
Product1-deoxy-D-xylulose-5-phosphate synthase 
Protein accessionYP_002340237 
Protein GI217961667 
COG category[H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism 
COG ID[COG1154] Deoxyxylulose-5-phosphate synthase 
TIGRFAM ID[TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000950231 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATCTAA CGCAAATTCA AAACCCTAGT TTTTTGAAAG AGATGTCTAT CAGTGAACTA 
GAGGGATTGA GTGAGGATAT TCGTAAGTTT TTAATTGAAG AGCTCTCTCA AACAGGTGGA
CATATTGCGC CTAATTTAGG TGTAGTAGAA CTCACAATTG CTCTGCATAA ATTATTTGAT
AGTCCGAAAG ATAAATTTTT ATGGGATGTA GGACATCAAT CCTATGTACA TAAAATTTTA
ACTGGACGTG CAAAAGAATT CGGCACATTA AGGCAATATC AAGGTCTATG TGGTTTCCCA
AAACGTTGTG AGAGTGAGCA CGATGTATGG GAAACTGGCC ATAGCTCGAC ATCATTATCT
GCTGCAATGG GAATGGCTCT AGCACGTGAT TTAAAGAAAA CGAAAGAATA TGTTATACCA
ATCATTGGTG ATGGCGCTTT AACGGGCGGA ATGGCTTTAG AGGCATTGAA CCATATTGGA
CATGAAAAAA CAGACATGAT TGTTATTTTG AATGATAATG AAATGTCAAT TGCGCCAAAC
GTTGGTGCGC TTCATAATGT GCTTGGACGT CTACGTACCG CAGGAAAATA CCATTGGGTA
AAAGATGAGT TGGAGTATAT TTTGAAGAAA ATCCCAGCTG TCGGTGGGAA AGTTGCTGCG
ACAGCAGAGA AAATAAAAGA TAGTCTTAAA TATTTACTAG TATCTGGTGT CTTTTTCGAA
GAGTTAGGCT TTACATATTT AGGTCCAGTC GATGGACATG ATTATGAAAA GTTATTCGAA
ACGTTGCAAT ATGCAAAGAA AACAAAAGGC CCAGTGCTTG TTCATGTTAT TACGAAAAAA
GGAAAAGGTT ACAAACCAGC TGAGAGTGAT GTTATTGGCA CTTGGCATGG AACAGGACCT
TATAAAATTG AATCAGGTGA CTTCGTTAAA CCGAAAGAAG TTGCACCAGC ATGGAGTGCT
GTTGTTAGTG AAACAGTACT TAAGTTAGCG AGAACGGATG AGCGTATCGT TGCAATTACA
CCTGCAATGC CTGTTGGATC GAAACTTGAG AAATTCCAAA AAGAATTCCC AGATCGTATG
ATTGATGTAG GTATTGCAGA ACAGCATGCT ACAACAATGG CAGCGGGTAT GGCAACGCAA
GGTATGAAAC CATTCTTAGC GATTTATTCA ACATTTTTAC AAAGAGCTTA TGACCAAGTT
GTTCATGATA TATGCCGCCA AAATTTAAAT GTTTTCATCG GAATTGATCG CTCTGGTTTA
GTAGGAGCAG ATGGTGAAAC GCATCAAGGT GTATTTGACA TCTCATTCTT ACGCCACTTG
CCGAATATGG TACTTATGAT GCCAAAAGAT GAAAATGAAG GGCAACATTT AGTATACACG
GCGATGCAAT ATGAAGATGG ACCAATCGCA TTACGTTATG CGCGAGGTAA TGGACTTGGC
GTTCATATGG ATGAAGAATT AAAGGCGATT CCAATCGGTT CATGGGAAAC GTTAAAAGAA
GGTACACAAG CAGCTATTTT AACATTTGGT ACGACAATAC CAATGGCAAT GGAAGCGGCT
GAGCGTCTTG AAAAGGCTGG AGTTTCAGTG AAAGTAGTGA ACGCTCGCTT CATTAAACCA
ATGGATGAAG CATATTTACA TGATCTCTTA GGAAAAAATA TACCAATTTT AACGATTGAA
GAAGCTTGCT TAATTGGTGG TTTTGGAACA GGAGTAGTTG AATTTGCGTC TGAGAACGGG
TACCATAGTG CGTTAGTTGA ACGAATGGGT ATTCCAGATC GTTTCATAGA GCACGGTAGT
GTAACAAAAT TATTAGAAGA AATCGGTTTA ACGACAGATG CTGTTGTAGA CCGTATTCAT
ACAATGATTC CATCAAAACA AAAAAGGGCG TAA
 
Protein sequence
MDLTQIQNPS FLKEMSISEL EGLSEDIRKF LIEELSQTGG HIAPNLGVVE LTIALHKLFD 
SPKDKFLWDV GHQSYVHKIL TGRAKEFGTL RQYQGLCGFP KRCESEHDVW ETGHSSTSLS
AAMGMALARD LKKTKEYVIP IIGDGALTGG MALEALNHIG HEKTDMIVIL NDNEMSIAPN
VGALHNVLGR LRTAGKYHWV KDELEYILKK IPAVGGKVAA TAEKIKDSLK YLLVSGVFFE
ELGFTYLGPV DGHDYEKLFE TLQYAKKTKG PVLVHVITKK GKGYKPAESD VIGTWHGTGP
YKIESGDFVK PKEVAPAWSA VVSETVLKLA RTDERIVAIT PAMPVGSKLE KFQKEFPDRM
IDVGIAEQHA TTMAAGMATQ GMKPFLAIYS TFLQRAYDQV VHDICRQNLN VFIGIDRSGL
VGADGETHQG VFDISFLRHL PNMVLMMPKD ENEGQHLVYT AMQYEDGPIA LRYARGNGLG
VHMDEELKAI PIGSWETLKE GTQAAILTFG TTIPMAMEAA ERLEKAGVSV KVVNARFIKP
MDEAYLHDLL GKNIPILTIE EACLIGGFGT GVVEFASENG YHSALVERMG IPDRFIEHGS
VTKLLEEIGL TTDAVVDRIH TMIPSKQKRA