Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCAH187_A4243 |
Symbol | ribD |
ID | 7078468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus AH187 |
Kingdom | Bacteria |
Replicon accession | NC_011658 |
Strand | + |
Start bp | 3947766 |
End bp | 3948878 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643452660 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_002340173 |
Protein GI | 217961603 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATC AAGAATATAT GAGGATTGCT CTGCAATTAG CAGAAGGAAC ATCTGGGCAA ACAAGTCCAA ATCCTATGGT TGGTGCTGTT GTTGTAAAAG ACGGAAACAT CGTCGGTATG GGGGCTCATT TACGTGCTGG TGAAGAACAC GCAGAAGTTC ATGCTCTTCA TATGGCTGGT GACAAAGCAA AAGGAGCCAC CGTGTATGTA ACACTTGAAC CGTGTAGCCA TTTTGGAAAA ACACCACCTT GCTGTGAATT GCTCATCAAA AAAGAAGTCA AACGGGTTGT AATTGCTACT CTTGATTGCA ATCCTCTCGT TTCTGGTAAT GGAAAAAAAA GATTAGAGGA AGCTGGCATC GAAGTAACTA CTGGTGTTCT GGAAGAAGAA GCAGTTTTAT TAAATCGCTA CTTTTTTCAC TACATGAAAA CGAAACGTCC ATTTGTAACA ATAAAAACAG CGATGAGCTT AGACGGAAAA ACAGCAACCG TAACCGGTGA AAGTAAGTGG ATTACAAGTG AAGATGCACG AGCTGATGTT CATCAATATC GTCACACACA CGATGCAATT CTTGTTGGAG TGAATACAGT TATAGCTGAT AATCCGCATT TAACAACAAG AATTCCTAAC GGAGGGCAAA ATCCTATACG CGTTATTTTA GATACCCATT TACGAACGCC ACCATCTTCT CATGTCATAA CAGATAGTTT AGCACCGACA TGGATTATAG TTGGTAAGGA TGTAAATCCA GAGAAAATAG CTTCTTATGA ATCTGAAAAT ATAGCTATAT TCCAAATGAA AACGAAACAG ATTGAAATAC AGGATGTTTT ACACCTACTC GGCGAAAAAC AAATTCTTTC TCTTTTCGTC GAAGGTGGTC AAACCGTTCA TGCAAGTTTC TTACAAACAA AGTATTTCAA TGAAATTGTA ACTTATATAA GCCCAAAATT AATTGGTGGA AAAAATGCCC CTACTTTATT TGGCGGCAAT GGTTTTTCAA CATTACAAGA TGCACTTTCC TTGGAAATTC AAGAGATGAA ACAAGTTGGC GATGACATAA AAATTGTTGC GCATGCCCGA AGTGAGGTGA TGGAATGTTT ACAGGAATTG TAG
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Protein sequence | MTDQEYMRIA LQLAEGTSGQ TSPNPMVGAV VVKDGNIVGM GAHLRAGEEH AEVHALHMAG DKAKGATVYV TLEPCSHFGK TPPCCELLIK KEVKRVVIAT LDCNPLVSGN GKKRLEEAGI EVTTGVLEEE AVLLNRYFFH YMKTKRPFVT IKTAMSLDGK TATVTGESKW ITSEDARADV HQYRHTHDAI LVGVNTVIAD NPHLTTRIPN GGQNPIRVIL DTHLRTPPSS HVITDSLAPT WIIVGKDVNP EKIASYESEN IAIFQMKTKQ IEIQDVLHLL GEKQILSLFV EGGQTVHASF LQTKYFNEIV TYISPKLIGG KNAPTLFGGN GFSTLQDALS LEIQEMKQVG DDIKIVAHAR SEVMECLQEL
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