Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCAH187_A3957 |
Symbol | sigE |
ID | 7076084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus AH187 |
Kingdom | Bacteria |
Replicon accession | NC_011658 |
Strand | - |
Start bp | 3710109 |
End bp | 3710828 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643452383 |
Product | sporulation sigma factor SigE |
Protein accession | YP_002339894 |
Protein GI | 217961326 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000112899 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAT TAAAATTTTA TTTAGTATAC CTTTGGTATA AAGTATTGTT GAAATTAGGA ATTAAGACCG ATGAAATTTA TTACATTGGT GGAAGTGAAG CGTTACCACC GCCGTTAACG AAAGAAGAAG AGGAAGTTCT TTTGAATAAA TTGCCAAAAG GAGATCAGGC AGCAAGGTCG TTACTGATTG AACGCAATTT ACGGCTAGTT GTATATATAG CAAGAAAGTT TGAAAATACA GGGATAAATA TTGAAGATTT AATTAGCATT GGAACAATTG GGCTTATTAA AGCGGTAAAT ACATTTAATC CAGAAAAGAA AATAAAATTA GCAACATATG CATCACGTTG TATAGAAAAT GAAATTTTAA TGCATTTGCG CCGGAATAAT AAAAATCGTT CAGAAGTTTC TTTTGATGAA CCGCTTAACA TCGATTGGGA CGGGAATGAA CTTTTATTAT CAGATGTATT AGGGACAGAC GATGATATTA TTACAAAAGA TTTAGAGGCT ACGGTTGATC GTCATCTTCT AATGAAAGCA TTACATCAAT TAAATGATCG TGAAAAACAA ATTATGGAAC TTCGGTTTGG GCTTGCTGGA GGAGAGGAAA AGACGCAAAA AGATGTAGCG GATATGCTTG GGATTTCACA GTCATACATT TCGCGTTTAG AAAAAAGAAT CATAAAAAGA TTAAGAAAAG AATTTAATAA AATGGTGTAA
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Protein sequence | MMKLKFYLVY LWYKVLLKLG IKTDEIYYIG GSEALPPPLT KEEEEVLLNK LPKGDQAARS LLIERNLRLV VYIARKFENT GINIEDLISI GTIGLIKAVN TFNPEKKIKL ATYASRCIEN EILMHLRRNN KNRSEVSFDE PLNIDWDGNE LLLSDVLGTD DDIITKDLEA TVDRHLLMKA LHQLNDREKQ IMELRFGLAG GEEKTQKDVA DMLGISQSYI SRLEKRIIKR LRKEFNKMV
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