| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A3880 |
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| Symbol | topA |
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| ID | 7076237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus AH187 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011658 |
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| Strand | - |
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| Start bp | 3636348 |
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| End bp | 3638426 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643452310 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002339821 |
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| Protein GI | 217961253 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000115411 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATT ACCTCGTAAT CGTGGAGTCG CCTTCTAAGG CGAAGACCAT TGAGAAATAT
TTAGGGAAAA AATACAAAGT TGTCGCGTCT ATGGGACACG TTCGCGATTT ACCTAAAAGC
CAAATGGGGA TAGAAGTAAA GAACAACTTC ACCCCGAAGT ATATTACCAT TCGTGGTAAA
GGTCCCGTCT TAAAAGACTT AAAATCAGCA GCAAAAAAAG CAAAGAAAGT CTATCTCGCG
GCCGATCCAG ACCGCGAAGG GGAAGCTATT GCTTGGCATT TAGCCAATAC GTTAAATGTG
GACGTTGAAT CAGATTGCCG AGTTGTGTTT AATGAGATTA CAAAAGATGC AATAAAAGAA
TCATTCAAAC ATCCTCGCGC GATTAACATG AATTTAGTAG ATGCACAACA AGCAAGACGT
ATACTAGATC GTCTTGTTGG TTACAATATT AGTCCTTTAT TATGGAAGAA AGTAAAAAAA
GGATTAAGTG CAGGACGCGT ACAATCTGTA GCAGTTCGTT TAATTATCGA ACGTGAAAGA
GAAATACAAA GTTTCGAGCC TGAAGAATTC TGGACAATTA AGACAGAATT TGTGAAAGGG
AAAGACACAT TTGAAGCAAG CTTTTACGGT GTAGATGGTG AAAAAGTTCA ATTAACGAAT
GAAACACAAG TGAATGAAAT AATTGAACGG CTGAAAGATA ATGCGTTCTC AGTTGAAAAT
GTAACGAGAA AAGAGCGAAA ACGTAATCCA GCATTACCAT TTACAACATC TTCCTTGCAA
CAAGAGGCGG CGCGTAAGTT AAACATGCGA GCAAAGAAAA CGATGATGCT TGCGCAGCAA
TTGTATGAAG GAATTGATCT TGGAAAACAA GGAACTGTAG GTCTTATTAC GTATATGAGA
ACTGATTCAA CACGTATCTC AGAAACAGCT CAAACAGAGG CACGTACGTA CATTACTGAG
GCGTTTGGTA CGGAATACAT AGGAACAGAA AAGAAGAAAG AAACGAAGAA GTCGAACGCA
CAAGATGCGC ATGAGGCAAT TCGTCCTACT TCGGTAATGA GAAAGCCAGA GGAACTAAAG
AGTTTCTTAA GTCGTGACCA ACTTCGATTG TATAAATTGA TTTGGGAGCG ATTTGTTGCA
AGTCAAATGG CGTCTGCTAT AATGGATACT GTGACAGCGA GACTCATTAA TAATAATGTT
CAGTTCCGTT CAAGTGGATC GGTTGTAAAG TTCCCAGGAT TTATGAAAGT GTATGTAGAG
TCGAAAGATG ATGGGGCTGA AGAAAAGGAT AAGATGTTGC CACCTTTAGA AGTAGGGGAA
ACCGTATTTT CGAAGGATTT AGAACCGAAG CAACACTTTA CACAACCTCC GCCGCGCTAT
ACAGAGGCTC GTTTAGTAAG AACACTTGAA GAGCTTGGAA TTGGAAGACC GTCGACTTAC
GTACCGACAC TTGAAACGAT TCAAAAACGT GGATATGTAG GTTTGGATAA TAAACGCTTC
GTTCCAACTG AACTAGGTGA AATAGTAATT GAACTTATTT TAGAGTTTTT CCCGGAAATT
ATTAACATTG AATTTACTGC TAACATGGAG CAAAGCCTCG ATGAAGTAGA AGAAGGAAAT
GCGAATTGGG TAAAAATTGT TGATGATTTC TACGTAGGAT TTGAACCGCG TTTAGAAAAA
GCGGAAAAAG AAATGCGTGA AGTGGAAATT AAAGATGAAC CAGCTGGGGA AGATTGTGAA
TTATGTAATC ACCCAATGGT CTTTAAAATG GGTAAATACG GGAAATTTAT GGCTTGCTCG
AATTTCCCAG ATTGTCGTAA TACAAAACCG ATTGTGAAAG AAATCGGTGT TACTTGTCCG
AAATGTGATA AAGGTCAAAT TATTGAACGT CGTAGTAATA AAAAGAAACG TCTTTTCTAT
GGGTGCGGTA CGTATCCAGA GTGTGACTTT GTATCTTGGG ATAAGCCGAT TGGCCGTAAA
TGTCCGAAGT GTGAAGGTAT GCTAGTAGAG AAGAAGTTGA AAAAAGGCGT ACAAGTACAA
TGTATTTCGT GTGATTATGA AGAAGAACAA CAAATGTGA
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| Protein sequence | MSDYLVIVES PSKAKTIEKY LGKKYKVVAS MGHVRDLPKS QMGIEVKNNF TPKYITIRGK
GPVLKDLKSA AKKAKKVYLA ADPDREGEAI AWHLANTLNV DVESDCRVVF NEITKDAIKE
SFKHPRAINM NLVDAQQARR ILDRLVGYNI SPLLWKKVKK GLSAGRVQSV AVRLIIERER
EIQSFEPEEF WTIKTEFVKG KDTFEASFYG VDGEKVQLTN ETQVNEIIER LKDNAFSVEN
VTRKERKRNP ALPFTTSSLQ QEAARKLNMR AKKTMMLAQQ LYEGIDLGKQ GTVGLITYMR
TDSTRISETA QTEARTYITE AFGTEYIGTE KKKETKKSNA QDAHEAIRPT SVMRKPEELK
SFLSRDQLRL YKLIWERFVA SQMASAIMDT VTARLINNNV QFRSSGSVVK FPGFMKVYVE
SKDDGAEEKD KMLPPLEVGE TVFSKDLEPK QHFTQPPPRY TEARLVRTLE ELGIGRPSTY
VPTLETIQKR GYVGLDNKRF VPTELGEIVI ELILEFFPEI INIEFTANME QSLDEVEEGN
ANWVKIVDDF YVGFEPRLEK AEKEMREVEI KDEPAGEDCE LCNHPMVFKM GKYGKFMACS
NFPDCRNTKP IVKEIGVTCP KCDKGQIIER RSNKKKRLFY GCGTYPECDF VSWDKPIGRK
CPKCEGMLVE KKLKKGVQVQ CISCDYEEEQ QM
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