Gene BCAH187_A1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCAH187_A1886 
Symbol 
ID7073354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus AH187 
KingdomBacteria 
Replicon accessionNC_011658 
Strand
Start bp1742587 
End bp1743153 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content33% 
IMG OID643450350 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_002337841 
Protein GI217959293 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00957096 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA ATGAGAAAAA TTATATAAAA AGATTAAAGC GACAAAAAGA AGATGCGCTA 
GAATTTGTTG TCGATACATA CTTACCGCTC ATAAAAGGAA TAACCCACAA AGTTCTTCTT
CCAGTTCAAA ATGATGGACT CATAGAGGAA TGTGTAAACG ATATATTTCT TTCCATATGG
AATAACGCAA ATAAATTTCA TGGAGAACCA AATGATTTTA AAAAATGGAT TGCGGCAATT
GCGAAATTTA AGGCGATTGA TTATTACCGG AAGGCAACTA AAAAAGTAGA GATTATTTCG
GATGAGTTTC ATATTAGTAC GGAAAAGTCA GCAGAAGATG AATTAATCGT TATGGAAGAT
AGGGAAGAGT TATTGAAGCT TATTAATCAA TTAGAACCGT TAGATCAAAA GGTGTTCATT
ATGAAATATC TTCTTGGTAT GAAGACAGAA GAAATAGGAG ACAAGTTAGG GTTAACTCGG
GCAGCGATAG ATAATCGTGT GTATCGTGGA AAAAAGAAAC TACAACAAAA TGCTACGAAA
ATTAGTTTTG GAGGTAGTGT CATATGA
 
Protein sequence
MKSNEKNYIK RLKRQKEDAL EFVVDTYLPL IKGITHKVLL PVQNDGLIEE CVNDIFLSIW 
NNANKFHGEP NDFKKWIAAI AKFKAIDYYR KATKKVEIIS DEFHISTEKS AEDELIVMED
REELLKLINQ LEPLDQKVFI MKYLLGMKTE EIGDKLGLTR AAIDNRVYRG KKKLQQNATK
ISFGGSVI