| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A1340 |
|---|
| Symbol | |
|---|
| ID | 7074459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | + |
|---|
| Start bp | 1259528 |
|---|
| End bp | 1260544 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643449818 |
|---|
| Product | oligopeptide ABC transporter, permease protein |
|---|
| Protein accession | YP_002337310 |
|---|
| Protein GI | 217958762 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000803209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAG ATGTACAAAA ATTATCTCCA GACTTATTTC AACAAGCTAA TCAAAATAAT
GTGGATAATG AAGTCATTGC CCGTCCAAGC TTAACGTTTT GGCAAGATGT AAGAAGACGT
TTGTTCCAAC ATAAAGGAGC AATGTTTGGT TTAGTTTTAT TAACGCTTAT TATCTTACTA
GCAATCTTCG GACCGATGGT AAGTAAGCAC TCGTATAAAG AGCAAGATTT AGGACGTGCA
AAATTGCCAC CGAAAATTCC AGTTATTGAA AATGTTCATT GGTTACCATT TGACGGTACA
GATCAATATG GTGTTGACCA ATATGAAAAA CGTGATATTA AAGAGTATTT CTGGTTTGGT
ACAGATGATC TTGGACGCGA TTTATGGACA AGAACATGGG AAGGTACACG CGTATCATTA
TATATCGCTC TTTTAGCAGC AGCAATTGAC TTAGTAATTG GGGTTGCATA TGGAGGTATT
TCAGCGTTCT ATGGCGGTAG AGTAGATAAC ATTATGCAAC GTATTATGGA GATTATTAAC
GGTATTCCAT ACTTAATCAT CGTTATTTTA ATGGTAATCA TTATGGGATC TGGTATATGG
TCAATTACAC TCGCAATGGC AATTACAGGT TGGATAGGGA TGTCGCGTAT CGTTCGTGGA
CAAATCCTTA AATTAAAAAA TCAAGAATAC GTATTAGCAT CTCGTACATT AGGTGCAACA
AATACACAAT TAATTGTAAA ACACTTAATC CCGAACGTAA TGGGACCAAT TATCGTAATG
ACAATGTTTA CAATTCCAAC AGCGGTGTTT GGTGAGGCGT TCTTAAGCTT CATCGGTTTA
GGTATTCAGC CACCATTCGC ATCACTTGGT TCTCTTGTAA ATGACGGTTA TAAATCAATT
CAAACGTATC CGCATATGAT GTTCATTCCT GCGGTTGTCA TCAGTATATT AATTTTAGCG
TTTAACTTAA TGGCAGACGG ATTACGCGAT GCGTTAGATC CAAAAATGCG TAAGTAA
|
|---|
| Protein sequence | MMKDVQKLSP DLFQQANQNN VDNEVIARPS LTFWQDVRRR LFQHKGAMFG LVLLTLIILL
AIFGPMVSKH SYKEQDLGRA KLPPKIPVIE NVHWLPFDGT DQYGVDQYEK RDIKEYFWFG
TDDLGRDLWT RTWEGTRVSL YIALLAAAID LVIGVAYGGI SAFYGGRVDN IMQRIMEIIN
GIPYLIIVIL MVIIMGSGIW SITLAMAITG WIGMSRIVRG QILKLKNQEY VLASRTLGAT
NTQLIVKHLI PNVMGPIIVM TMFTIPTAVF GEAFLSFIGL GIQPPFASLG SLVNDGYKSI
QTYPHMMFIP AVVISILILA FNLMADGLRD ALDPKMRK
|
|---|
| |