Gene BCAH187_A0378 details

Gene Information

• Locus tag: BCAH187_A0378
• Symbol: ligA
• ID: 7078297
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus AH187
• Kingdom: Bacteria
• Replicon accession: NC_011658
• Strand: +
• Start bp: 336981
• End bp: 338990
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643448879
• Product: NAD-dependent DNA ligase LigA
• Protein accession: YP_002336408
• Protein GI: 217957864
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II)
• TIGRFAM ID: [TIGR00575] DNA ligase, NAD-dependent

Plasmid Coverage information

• Num covering plasmid clones: 62
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAAG AGATAGCAAA AAAACGTATA GAAGAATTAC GTGATTTGTT AAATACATTT 
AACTATCAAT ATCACGTATT AGACAATCCT TCTGTTTCTG ATGCGGAGTA TGACCGTAAT 
ATGCAGGAGC TTATAAAATT AGAAGCAGAG AATCCAGAGT TTATGAGTGA AGATTCTCCC 
TCCGTTCGCG TTGGGGGAAC GGTTCTTGAT ATATTTGAAA AAGTAACACA TAAGTCACCG 
ATGTTAAGTT TAGGAAATGC ATTTAACGAA GGGGATTTAC GTGATTTTGA CCGACGAGTA 
CGTCAAGGAA TTGATGATGC GAATGTAAGA TATATATGCG AATTAAAAAT TGACGGACTT 
GCTGTTTCAC TTCATTATGA AAAAGGACGC TTCATTCAAG GGGCAACACG TGGTGATGGT 
GTAACAGGTG AAGATATTAC CCAAAATTTA AAAACGATTA AAGCAATCCC GCTTCGTTTA 
AATGAAGAAG TAACGTTAGA GGCACGAGGC GAAGCTTATA TGCCGAAGCG TTCATTCGTT 
AAGTTAAATG AAGAAAAAGA GCAAAATGGT GAAGATGTAT TTGCGAATCC GCGTAATGCG 
GCAGCAGGTT CAATCCGCCA ACTTGATCCG AAAATTGCAG CGAAGCGTAA CTTATCTATG 
TTTGTATACG GTCTTGCGAA TGTAGAAGAA AAAACAATCC TATCACATAG TGAATCGCTT 
GATTTCTTAG GTGAACTTGG ATTCAAAACA AATCCAAATC GACGCACATG TGAAACAATT 
GAAGAAGTTA TAGCTTATGT AGAAGAATGG CAAGAAAAAC GTCCGCATCT TGATTATGAG 
ATTGATGGGA TCGTTATAAA AGTAGATGAT GTCGCTCTTC AAGAAAGTCT AGGCACTACA 
GCAAAGAGTC CAAGATGGGC AATTGCTTAT AAATTCCCAG CTGAAGAAGT TGTAACAAGA 
TTAACAGGCA TTGAATTAAG TGTTGGTCGT ACAGGGGTTG TAACACCGAC TGCAGAGCTA 
GAGCCAGTGC GAGTGGCTGG TACGATCGTT CGTCGTGCTT CTTTACATAA CGAAGATTTA 
ATTCGTGAAA AAGATATTCG AATTGGTGAC TACGTTGTTG TGAAGAAGGC TGGAGATATT 
ATTCCTGAAG TTGTGAATGT TCTTTTCGAT AAGCGTACTG GTGAGGAAGA AGAATATCAT 
ATGCCAACGC ATTGTCCAGC ATGTGAGAGT GAACTAGTTC GTTTAGAAGA AGAGGTAGCA 
CTTCGTTGTA TAAATCCAAC TTGTCCTGCT CAAATTCGAG AAGGGTTAAT CCATTTCGTT 
TCAAGAAATG CAATGAATAT TGATGGACTT GGAGAACGTG TCATTACACA ACTCTTTGAG 
GCAGATTATA TTCGTACATT TGCTGATTTA TATTCGTTGA CGAAAGAGCA ATTATTACAG 
CTAGAACGAT TCGGAGAAAA ATCAGCAACG AATTTAGTAC AAGCAATTGA GAATTCTAAA 
GAAAACTCAT TAGAGCGATT ATTATTCGGT CTTGGTATTC GCCATGTCGG AGCGAAAGCA 
GCACGTACAT TTGCTGAGCA TTTTGAAACG ATGGATGCAC TTGTGAAAGC GACAGAAGAA 
GAACTAAAAG CAATTAACGA GATTGGTGAA AAAATGGCTC AATCCGTCGT GGCGTATTTT 
GATAATGAAG ACGTATTAGA GTTATTACAA CAATTTAAAG AATACGGCGT GAACATGACA 
TATAAAGGCA TGAAAATTGC TGATTTACAA AACGTTGAGT CGTACTTCGC AGGAAAAACT 
GTCGTTTTAA CAGGGAAATT AGAAGTTATG GGACGTAGTG AAGCGAAGAA GAAGATTGAG 
GCATTAGGTG GAAAAGTAAC AGGAAGTGTT AGTAAAAGTA CGGATTTAGT TGTTGCAGGT 
GAAGCGGCAG GTTCGAAATT AGCACAAGCG GAGAAACATA ATGTCGAGGT TTGGAATGAA 
GAGAGGTTCT TACAAGAGCT AAATAAGTAA 

 

Protein sequence

MSKEIAKKRI EELRDLLNTF NYQYHVLDNP SVSDAEYDRN MQELIKLEAE NPEFMSEDSP 
SVRVGGTVLD IFEKVTHKSP MLSLGNAFNE GDLRDFDRRV RQGIDDANVR YICELKIDGL 
AVSLHYEKGR FIQGATRGDG VTGEDITQNL KTIKAIPLRL NEEVTLEARG EAYMPKRSFV 
KLNEEKEQNG EDVFANPRNA AAGSIRQLDP KIAAKRNLSM FVYGLANVEE KTILSHSESL 
DFLGELGFKT NPNRRTCETI EEVIAYVEEW QEKRPHLDYE IDGIVIKVDD VALQESLGTT 
AKSPRWAIAY KFPAEEVVTR LTGIELSVGR TGVVTPTAEL EPVRVAGTIV RRASLHNEDL 
IREKDIRIGD YVVVKKAGDI IPEVVNVLFD KRTGEEEEYH MPTHCPACES ELVRLEEEVA 
LRCINPTCPA QIREGLIHFV SRNAMNIDGL GERVITQLFE ADYIRTFADL YSLTKEQLLQ 
LERFGEKSAT NLVQAIENSK ENSLERLLFG LGIRHVGAKA ARTFAEHFET MDALVKATEE 
ELKAINEIGE KMAQSVVAYF DNEDVLELLQ QFKEYGVNMT YKGMKIADLQ NVESYFAGKT 
VVLTGKLEVM GRSEAKKKIE ALGGKVTGSV SKSTDLVVAG EAAGSKLAQA EKHNVEVWNE 
ERFLQELNK