Gene UUR10_0523 details

Gene Information

• Locus tag: UUR10_0523
• Symbol: parE
• ID: 6984139
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ureaplasma urealyticum serovar 10 str. ATCC 33699
• Kingdom: Bacteria
• Replicon accession: NC_011374
• Strand: +
• Start bp: 599322
• End bp: 601250
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 4
• GC content: 29%
• IMG OID: 643400089
• Product: DNA topoisomerase IV subunit B
• Protein accession: YP_002284909
• Protein GI: 209554526
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01058] DNA topoisomerase IV, B subunit, Gram-positive

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAACA AATATGATGG TAGCGCTATT AAAATTCTAG AAGGATTAGA AGCTGTTCGC 
AAACGTCCTG GAATGTATAT TGGATCAACA AGTAGTGCTG GTTTACACCA TTTAGTTTGA 
GAAATTGTTG ATAATTCAAT TGATGAAGTT ATGAATGCTA ATGCAAAAAA CATTAGCGTT 
GTTTTGCATG AAGACAATTC AATTAGTATT TTAGATGATG GTCGAGGAAT TCCAGTTGAT 
ATTAATCCTC AAACAAAAAT TTCTACAGTT GAAACTGTAC TAACAGTTTT ACATGCTGGG 
GGAAAATTTG ATGAAAGCGC ATATAAAACC GCAGGTGGTT TGCATGGTGT TGGTTCATCA 
GTGGTTAATG CTTTAAGTGC TTGATTAATT TGTGAAGTGT ATCGTGATCA AAAAATTTAT 
CAAGCAAAAT TTAGTAATGG GGGACATATT GATCAACCAC TAAAAGTGAT TGGTACAACC 
AAAAAAACAG GAACGCTAAT TCATTTTTTA CCAGATCCTT TAATTTTTAA AAACTTATTT 
TTTAATCCAA ATACAATTAA GGAACGTTTG CATGAATCAA CTTTTTTAAT AAAAGATTTA 
AAAATTAGTT TTGAAGATAA AATCAACAAT AAAAAATACG AATTTATTAA TGATCAAGGT 
TTAATTGATT TTATTAAATT TATTAATGAA ACCAAAAAAA CATTTTCTGA TGTTATTTTT 
TTTAAAAATA CCATTAATAA AATCGATGTT GAAGTTGCTT TTCAATATAG TGATCAAAAC 
AATGAAATCA TGGTTTCATT CGCTAATTCT GTAAAAACTA GCGAAGGTGG TGTGCATGAA 
AACGCTTTTA AAAATGCTTT AACAAGTGTT GTTAATAATT ACGCACGAAA ACATGATTTA 
CTTAAAGAAA AAGATAAAAA CTTAGAAGGT GATGACATTC GTGAAGGTTT ATCTAGTGTA 
ATTTCACTAC GAATCCCAGA AAGCTTAATT AGTTATGAAG GGCAAACTAA AAATAAATTG 
TTCACACCAG AAGCAAATGA AGCAGTAAAA AAAACAATCG AAGATAATTT TAGTTTTTGA 
TTAGAAGAAA ATAAAACACA AGCCTTAGAT TTAGTTAATC GAGCAATTGT TGCACGAGAT 
GCTAAATTAG CTGCTAAACG TGCTCGTGAA GAAACTAAAA AAGTTAAAAA AATTAAAGAA 
GAACGTGGAA TGGGTGGTAA ACTAACACCT GCTCAAAGTA AAGATCCAAC TTTAAATGAA 
CTATTTTTAG TAGAGGGTGA TTCAGCTGGT GGATCAGCTA AACTTGGAAG AAATAAGAAA 
TATCAAGCAA TTTTACCTTT GAGAGGTAAA GTTCTTAATG TTTTAAAAGC ACGTTTAGTC 
GATGTTTTAA AAAATGAAGA AATTGCTTCA ATTTTTACTT GTTTAGGTAC AGGAATTGGT 
GCTGAATTTG ATTTAAAAAA ATTAAAATAT CACAAAATTA TTATTATGAC TGATGCTGAT 
ACTGATGGTA GTCATATTCA AGTTTTATTA CTAACATTGT TTTATCGTTT TATGCGTCCA 
TTAATTGAAA ATGGCAATAT TTATATTGCT TTACCACCAC TTTATAAACT AACAAATAAA 
AACACTAAAA AGTTCTTTTA TGCTTGAGAT GATGTGGAAT TAGACCAATT AAAAAAAGAA 
CAAAAAAATT ATGAAATTCA ACGTTATAAA GGACTTGGTG AAATGAATGC TGATCAACTA 
TTTGAAACAA CCATGGATCC AAGTAAGCGT TTATTATTAA GAGTTAATAT CAATGATATT 
TTACAAGCTG AACGTCAAAT CAATACTTTA ATGGGTAATG ATGTAAGTAT TCGAAGACAA 
TGAATTGATA ATAATATTGA TTTTAGTGTC ATTGATGAAT TACAAATCAA TAATGAGGAG 
TCTAAATAA 

 

Protein sequence

MANKYDGSAI KILEGLEAVR KRPGMYIGST SSAGLHHLVW EIVDNSIDEV MNANAKNISV 
VLHEDNSISI LDDGRGIPVD INPQTKISTV ETVLTVLHAG GKFDESAYKT AGGLHGVGSS 
VVNALSAWLI CEVYRDQKIY QAKFSNGGHI DQPLKVIGTT KKTGTLIHFL PDPLIFKNLF 
FNPNTIKERL HESTFLIKDL KISFEDKINN KKYEFINDQG LIDFIKFINE TKKTFSDVIF 
FKNTINKIDV EVAFQYSDQN NEIMVSFANS VKTSEGGVHE NAFKNALTSV VNNYARKHDL 
LKEKDKNLEG DDIREGLSSV ISLRIPESLI SYEGQTKNKL FTPEANEAVK KTIEDNFSFW 
LEENKTQALD LVNRAIVARD AKLAAKRARE ETKKVKKIKE ERGMGGKLTP AQSKDPTLNE 
LFLVEGDSAG GSAKLGRNKK YQAILPLRGK VLNVLKARLV DVLKNEEIAS IFTCLGTGIG 
AEFDLKKLKY HKIIIMTDAD TDGSHIQVLL LTLFYRFMRP LIENGNIYIA LPPLYKLTNK 
NTKKFFYAWD DVELDQLKKE QKNYEIQRYK GLGEMNADQL FETTMDPSKR LLLRVNINDI 
LQAERQINTL MGNDVSIRRQ WIDNNIDFSV IDELQINNEE SK