| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | UUR10_0481 |
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| Symbol | rrmJ |
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| ID | 6983746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ureaplasma urealyticum serovar 10 str. ATCC 33699 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011374 |
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| Strand | + |
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| Start bp | 530945 |
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| End bp | 531688 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 4 |
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| GC content | 22% |
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| IMG OID | 643400053 |
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| Product | ribosomal RNA large subunit methyltransferase J |
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| Protein accession | YP_002284873 |
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| Protein GI | 209554296 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1189] Predicted rRNA methylase |
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| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00671822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCAAA GATTAGATCA TTATTTAAAA AATACTAATC AATGTGAAAC ACGATCAAAA
GCAATTGATT TAATTAAACG TGGTTTTGTA TTTGTTAATA ATTTACAAAT ATTAAAACCA
TCATTTTTAG TTCAAGAAAA TGATTTTGTA GACATTAAAA ATAATGAAAA TAATTTTGTT
TCTAAAGGTG GATATAAACT CTTTAAAATT ATTCAAGAAT TAAATTTAAA AATTAAAGAT
TTTATAATTG CTGATTTAGG AAGTTCAACA GGCGGATTTA CTGATTGTTG TTTACAATTA
GGCGCTAAAA AAGTTTATGC AATTGATGTT GGTGTTGATT TGTTACATCC TAACTTAAAA
AATCATCCTA AAATTGTTAA TTATGAAAAA ACTAATGTTA AAAATTTAGA TAAATCATAC
TTTTTAGAAG AACTAGACTT AATAGTTGGT GATTTATCAT TTATTTCTTT AGAACAAATC
TTTCCAACAA TTGAAAAAAT TTCTTCATGC AAAACACTTC TTTTGTTGTT AATAAAACCC
CAATTTGAAT TAGGAAAAGA TATTGCTAAT AAATATAAAG GGATAATTAA AAATAAAAAC
CTACAACAAT TAGCTATAAA CAAAATAATT AATTTAGCAA ATAATTATGG TTTTAAATAT
AAACACTTAA CACCTACTGA TATTTTTGAT CAAAAAAAAC AAAACCAAGA ATATATGATA
TTTTTACAAA AATATGCAAA GTAG
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| Protein sequence | MSQRLDHYLK NTNQCETRSK AIDLIKRGFV FVNNLQILKP SFLVQENDFV DIKNNENNFV
SKGGYKLFKI IQELNLKIKD FIIADLGSST GGFTDCCLQL GAKKVYAIDV GVDLLHPNLK
NHPKIVNYEK TNVKNLDKSY FLEELDLIVG DLSFISLEQI FPTIEKISSC KTLLLLLIKP
QFELGKDIAN KYKGIIKNKN LQQLAINKII NLANNYGFKY KHLTPTDIFD QKKQNQEYMI
FLQKYAK
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