| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_6534 |
|---|
| Symbol | |
|---|
| ID | 6983604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011371 |
|---|
| Strand | - |
|---|
| Start bp | 205356 |
|---|
| End bp | 206936 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643399530 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_002284286 |
|---|
| Protein GI | 209552371 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.324444 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTAG ATATCGTAGC GCTTTCGCGC TTCCAATTCG CGCTGACGGC GCTGTACCAC
TTCCTGTTCG TACCGCTGAC GCTCGGCCTG TCCGTGCTTC TGGCGATCAT GGAAACCGTC
TATGTCATGA CCGGCCGCCA GATCTGGCGG CAGATGACGA AATTCTGGGG CACGCTGTTC
GGCATCAATT TTGTGATCGG CGTCGCCACC GGCATCGTCA TGGAATTCCA GTTCGGCATG
AACTGGAGCT ATTACAGCTA TTATGTCGGC GACATTTTCG GCGCGCCGCT GGCGATCGAA
GGCCTGATGG CCTTCTTCCT GGAGGCGACC TTCGTTGGTC TGTTCTTCTT CGGCTGGGAC
AAGTTGTCGA AGGTCGGCCA TCTCGTCGCC ACCTGGGCTG TGGCGCTCGG CTCGAATTTT
TCCGCCCTCT GGATCCTCAT CGCCAATGGC TGGATGCAGA ACCCGGTGGG ATCGGCGCTC
AATCCGCAGA CGATGCGCAT GGAGATCACA AGCTTCTTCG ACGTGGTCTT CAATCCGGTC
GCCCAAGCGA AATTCGTTCA TACGGTCTCG GCCGGTTATG TCTGCGCCTC GATCTTCGTG
CTCGGCGTTT CGGCCTGGTA TCTGCTAAAG GGCCGGCATA TCGAGCTTGC CAAGCGCTCG
ATGACAGTCG CCGCCTCCTT CGGCCTCGCC TCCGCACTCT CTGTGGTCGT GCTCGGCGAC
GAGAGCGGTT ATCTCGCCAC CGAAAACCAG AAGATGAAGC TCGCTGCGAT CGAAGGCATG
TGGAAGACAG AGCCGGCGCC GGCTGCCTTC ACTGCCTTCG GTTTCCCGGA TCAGGAGGCG
CGCGAGACGC ATTTCGCCGT GCATATCCCC TGGGTCATGG GCCTGATCGG CACGCGGTCG
CTGACGACAG AGATCCCCGG CATCGATAAG CTCGAACAGC AGGCCGAAAC CCGCATCCGC
GACGGCATCA AGGCCTATGA CGCGCTGATG CAGATCCGTG CAGCGCCGGC GCAGGATCAG
GTGGCGCAGG AGGTGCGCAG CTCCTTCGAG GATCTAGGCC ATGATTTGGG TTACGCTCTT
CTTCTGAAGC GCTATGTCGA CGATCCGCGC CAGGCAACCA ATGAGCAGAT CGTCCAGGCC
GCACGCGATA CCATCCCGCA TGTGCCGACG CTCTTCTGGT CCTTCCGCAT CATGGTCGGC
CTCGGCATCT TCTTCATCCT CTTGACCGCC ACCTTCTTCT GGCTGTCGGC GCGCCGGCAT
CTCGACAAAT ATCCGCTGCT GCTGAGGATT GCGGTGCTGG CGATCCCCCT GCCCTGGGTC
GCCATCGAGC TTGGCTGGGT CGTCGCCGAG TTCGGCCGCC AGCCCTGGGT GATCGAAGGC
GTGCTGCCGA CGGCGGCAGC CGTCTCCAGC CTCGGCGCCG GCACCGTGCT TTTGACGATC
ATCGGTTTTG CCGCGCTCTA CACGGTGCTG ATCGTCATCG AGATGGGCCT GATGATCAAG
GCGATCCGCC AGGGCCCTGA ACCGGACGAC GAGCCGGAAG CGGTGCTGAT TTCCGAAACC
CTCGTCCCGG CCGCGGAGTG A
|
|---|
| Protein sequence | MELDIVALSR FQFALTALYH FLFVPLTLGL SVLLAIMETV YVMTGRQIWR QMTKFWGTLF
GINFVIGVAT GIVMEFQFGM NWSYYSYYVG DIFGAPLAIE GLMAFFLEAT FVGLFFFGWD
KLSKVGHLVA TWAVALGSNF SALWILIANG WMQNPVGSAL NPQTMRMEIT SFFDVVFNPV
AQAKFVHTVS AGYVCASIFV LGVSAWYLLK GRHIELAKRS MTVAASFGLA SALSVVVLGD
ESGYLATENQ KMKLAAIEGM WKTEPAPAAF TAFGFPDQEA RETHFAVHIP WVMGLIGTRS
LTTEIPGIDK LEQQAETRIR DGIKAYDALM QIRAAPAQDQ VAQEVRSSFE DLGHDLGYAL
LLKRYVDDPR QATNEQIVQA ARDTIPHVPT LFWSFRIMVG LGIFFILLTA TFFWLSARRH
LDKYPLLLRI AVLAIPLPWV AIELGWVVAE FGRQPWVIEG VLPTAAAVSS LGAGTVLLTI
IGFAALYTVL IVIEMGLMIK AIRQGPEPDD EPEAVLISET LVPAAE
|
|---|
| |