Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6407 |
Symbol | |
ID | 6983478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011371 |
Strand | - |
Start bp | 52176 |
End bp | 54320 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643399404 |
Product | ABC transporter related |
Protein accession | YP_002284160 |
Protein GI | 209552245 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGTT TTCTGCATAC CAACCTGCAC TGTCTGGCGC TCGTCGCGCG TCATCATGGC GTCGATCTTG CGCCGGAGCG ATTGCAGCAT GACTATGCCG TCGGCAACGA TCCCGTTGCC GTGCGGCAGC TGCTGCGCAT GGCCAAGGAT GCCGGCCTCA GGGCCCGGCA TCTGACGCTC GACTGGCGAT CGCTGTTTCA ACTCGGCGAG GCCTTTCCGG CGCTGGCGGA ACTGACGAAC GGCAATTGGG TGGTCATCGC CGGCGCTGTC GGGAGCGGTG AGGATGAGAG AATTCGCGTT CTCGATCCGC TGGCGTCGCG TGCCGAAGTG ATGATGCTCA GCGAAGAGCA ATTCGCCAAG GCCTGGCTCG GATCGGTCGT CCTGCTGAAG CGCAATTATC GCATGTCCGA TGAAGACCGG CCTTTCGGCT TCCGCTGGTT CGTCCCCGAA ATCATCAAGC AGCGCAGCTT CTTCCGCGAT GTCGCGCTCG CAGCCATCGT GCTTTACGGC CTTGGACTGA CGACGCCGAT CTTCTTTCAG CTCGTCATCG ACAAGGTGCT GGTGCATCAG AGCTATGCGA CGCTGACGGT TCTGACGGCG GGCATTGCGA TCGCACTCGT CTTCGATGCG ACCTTCACCT TCCTGCGGCG CTATCTGCTG CTTTACGCGA CGAACAGGAT CGATATCCGC GTCGCGACAC GCACCTTCGG CCATCTGCTG AACCTGCCGA TCGCGCTCTT CGAGCAGGCT TCGGCCGGCG TTCTCGTCAA GCACATGCAG CAGACCGGGC GCATCCGTGA ATTCTTGACC GGGCGGCTGT TCCTCACACT GCTGGACGGC GTTTCCCTGC TGGTCTTCGT GCCGATCCTG CTTCTTTACA GCGTCAAGCT GACGCTGGTG GTGCTGGGTT TTGCAGCGCT TGTCGGGCTG GTGGTGATGA TGCTCGTCGG GCCGTTCCAG CGCCGGTTGC AGGCGCTTTA CCAGGCGGAA GGCGACCGCC AGGCCTTGCT GGTGGAAACC GTGCACGGCA TGCGCACCGT CAAATCGCTG GCGCTCGAGC CGCGCCAGCG CAAGGTGTGG GACGACTATT CGGCGCAGTC GATTTCCGTG CGGTTCCGGG TCGACAAGAT CTCGACCATC GCCCAGGCGA TGACCGGGCT GCTGGAGAAG CTGATGAGTG TCGCGATCAT CGGCCTCGGT GCGCTCGACG TCTTCAGCGG TGCGATGACC ATCGGCGCGC TTGTCGCCTT CAACATGCTC GCCGGCCGGG TTTCCGGCCC GCTCGTCCAG ATCGTCACCA TGGCGCATGA ATATCAGGAA GTGGCGCTCT CCGTGCGCAT GCTCGGCGAG ATCATGAACC AGCGGCCGGA GCAGGCAGGC CGCGGGCGTG GCGTGCGGCC GCATCTGCAG GGCCGCATCG AATTCGACAG GGTCTCCTTC CGCTACTCCC CGGACAGCGC GCCGGCGCTC GACAATGTCT CCTTCGCCGT TCCGGCGGGC TGCGTCTTCG GCGTGGTCGG CAAGAGCGGC TCGGGCAAGA CGACGATCAC CAGGCTCATC CAGGGACTCT ATCAGAGCCA GGAAGGGTTG GTGCGCATGG ACGGCTATGA CAGCCGCGAG ATCGACCTCG TGCACCTCAG AACCAGCATC GGCGTCGTGC TGCAGGATAA TTTCCTGTTT CGCGGCTCGG TCCGCGAGAA TATCGCCGCC GCCAAACCCG ATGCCAGTAT CGAGGAGATC ATGGAGGTCG CCCGCATCGC CGGCGCCGAG GAGTTCATCG AGCGCCTGCC GCGCGGCTTC GACACGATGC TGGAGGAAAA TGGCTCCAAC CTCTCCGGTG GCCAGAAGCA GCGGTTGGCC ATCGCTCGCG CGCTGATCAC CGATCCGAAG CTGTTGATTT TCGACGAGGC GACGAGCGCG CTCGATCCCG ACAGTGAGGC GATCATCCGC GAGAATCTGA GCCGCATCGC CGCCGGCCGC ACCGTCATCA TCGTCTCGCA CCGTCTTTCG ACGCTCGTCG ATGCCGATGC CATTCTCGTC GTCGATCGCG GCAAGGTCGC CGATATCGGC CGGCACGATC AGCTTGTATC GCGCTGCATG ACCTATCGCC ACCTGTGGGC CCAGCAAATG AGGCAGGTCG CATGA
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Protein sequence | MSGFLHTNLH CLALVARHHG VDLAPERLQH DYAVGNDPVA VRQLLRMAKD AGLRARHLTL DWRSLFQLGE AFPALAELTN GNWVVIAGAV GSGEDERIRV LDPLASRAEV MMLSEEQFAK AWLGSVVLLK RNYRMSDEDR PFGFRWFVPE IIKQRSFFRD VALAAIVLYG LGLTTPIFFQ LVIDKVLVHQ SYATLTVLTA GIAIALVFDA TFTFLRRYLL LYATNRIDIR VATRTFGHLL NLPIALFEQA SAGVLVKHMQ QTGRIREFLT GRLFLTLLDG VSLLVFVPIL LLYSVKLTLV VLGFAALVGL VVMMLVGPFQ RRLQALYQAE GDRQALLVET VHGMRTVKSL ALEPRQRKVW DDYSAQSISV RFRVDKISTI AQAMTGLLEK LMSVAIIGLG ALDVFSGAMT IGALVAFNML AGRVSGPLVQ IVTMAHEYQE VALSVRMLGE IMNQRPEQAG RGRGVRPHLQ GRIEFDRVSF RYSPDSAPAL DNVSFAVPAG CVFGVVGKSG SGKTTITRLI QGLYQSQEGL VRMDGYDSRE IDLVHLRTSI GVVLQDNFLF RGSVRENIAA AKPDASIEEI MEVARIAGAE EFIERLPRGF DTMLEENGSN LSGGQKQRLA IARALITDPK LLIFDEATSA LDPDSEAIIR ENLSRIAAGR TVIIVSHRLS TLVDADAILV VDRGKVADIG RHDQLVSRCM TYRHLWAQQM RQVA
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