Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_6117 |
Symbol | |
ID | 6983190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011370 |
Strand | - |
Start bp | 44137 |
End bp | 45795 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643399139 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002283895 |
Protein GI | 209551979 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.154468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.620567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACAAG TAGACATACT GCCAAAAACA GAGGGGATCT CCTCAAACGA GCGACGCGTC ATTGTTGCTG CATCACTCGG AACAGTTTTT GAATTCTACG ACTTTTTTCT CATTGGATTG TTAGCTAATG AAATTTCGAA AGCATTTTTT TCCGGCGTAA ACCCAACAGC TGGTTTCATC TTTACGCTTC TCGGCTTTGC GGCAGGCTTT TTGTTAAGGC CGTTCGGGGC GATCGTGTTT GGTCGCCTTG GTGACATGGC AGGGAGAAAA TATACGTTTC TGGTGACGAT ATTGCTGATG GGCATATCGA CTTTCACAAT AGGTCTACTA CCGGCCTATT CTACGATAGG CCTTGCGGCA CCTCTTGGGT TTGTGGCGAT GCGGATGCTG CAAGGCCTCG CTCTTGGTGG AGAGTTCGGC GGTGCGCTAA TCTATGTTGC CGAACACGCG CCTGCGAACC GAAGGGCGGC CTGGACGGCC TGGGTGATAT TGACGGCCGC GCTTGGATTT CTCTTGGCAG TCGCTGTCAT CATTCCTCTA AGGCTGGCAA TTGGCGCTGA TGCCTTCTCT CTTTGGGGAT GGCGCGCCCC CTTTCTTGTT TCAATCCTAC TGCTCGGAGT TTCTTTGTGG ATTCGATTGA AATTGGACGA AACTCCCGAG TTCATAAGGA TGAAGGCGGA GGGAAAGGCA TCTAAAGCCC CAATCTCGGA AACGCTTGGA ACGTGGAAAA ACCTCCGCCT TGTGCTAATC GCTGCGCTCT GCATCGTTCC GGGGCAGGCG GTTGTATGGT ACACTGGCCA ATTCTACTCG TTGTTCTTTT TAACTAAAGT GTTGCGGATC GAAAATCTGA CAGCAAATTT TCTGCTGATC GCTGCGACGA TCATCACGGC CCCTCTTTAC GTTGTCTTTG GTGCGTTGTC TGACCGTATC GGTCGCCGGC CAGTTTACGT GGCTGGTTTC CTGCTTGCAG CTGTATTTAC GGTCCCCCTT TTCAAAGCTC TTACGCACTA CGGCAACCCG ACACTCGAAC AAGCGCAAAT TAATGCGCCC ATCACAATTG TATCAGGGAG TGACGCTTGT TCAGTACAAT TCAATCCGCT GGGCACCGCA AAACCAATCA CATCTTGCGA CATCGTGGTC GACGCGATCG CAAAACTTGG TCTGAATTAC AATAGTGCAC ACTCAGCAGA GTCAGCGACT ACAATCGTGA AGATCGGCGA CCGTGAGGTT CCTGGATACT CCGCCGATAC ATCCGACGTT TCCGTTAAAA AAACACGGTT TGAATCGGAA CTGAAGACAG CATTGACCGA TATGGGCTAT CCCTTAGGAG AAGCCGCCCA TGAAGACATC AATCAAACTA TGATCGTCGT TCTATTGTCC ATCCTTTTAT GCTTTGGAAC GATGACGTTC GCGCCTTCGA CAACTGCTCT ACTCGAAATG TTCCCTTCGC GGATACGGTA TACTGCCATG TCATTTCCCT ATCACCTAAG TGCAGCGTGG TTTGGTGGGT TCCTACCCGC GACAGCGTTT GCCATCGTTG CGTCCACCGG CAACATTTAT TCTGGGCTTT ATTATCCGGC GTGCATCGCT GCAGCTTGTA TAGTCTTGAG CACTATCTTT GCGAACGAGA CAAAAGGAGC GGATCTCTCC GGAGATTGA
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Protein sequence | MVQVDILPKT EGISSNERRV IVAASLGTVF EFYDFFLIGL LANEISKAFF SGVNPTAGFI FTLLGFAAGF LLRPFGAIVF GRLGDMAGRK YTFLVTILLM GISTFTIGLL PAYSTIGLAA PLGFVAMRML QGLALGGEFG GALIYVAEHA PANRRAAWTA WVILTAALGF LLAVAVIIPL RLAIGADAFS LWGWRAPFLV SILLLGVSLW IRLKLDETPE FIRMKAEGKA SKAPISETLG TWKNLRLVLI AALCIVPGQA VVWYTGQFYS LFFLTKVLRI ENLTANFLLI AATIITAPLY VVFGALSDRI GRRPVYVAGF LLAAVFTVPL FKALTHYGNP TLEQAQINAP ITIVSGSDAC SVQFNPLGTA KPITSCDIVV DAIAKLGLNY NSAHSAESAT TIVKIGDREV PGYSADTSDV SVKKTRFESE LKTALTDMGY PLGEAAHEDI NQTMIVVLLS ILLCFGTMTF APSTTALLEM FPSRIRYTAM SFPYHLSAAW FGGFLPATAF AIVASTGNIY SGLYYPACIA AACIVLSTIF ANETKGADLS GD
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