Gene Rleg2_6090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6090 
Symbol 
ID6983163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand
Start bp15671 
End bp16948 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content58% 
IMG OID643399116 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002283872 
Protein GI209551956 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACC TATATCATAA CGTGCCTCGC AGGTCGGTCC TGAAGGGCGG CTTTGGTCTT 
GCAGTCGGGC TCGGCGTCAC ACTAAAGGCA CCGGCGATGC TGGCTCAGGA CAAAAGCCTT
TCGCTGATGG TGCTCGGTCC GGACCAGAAG GCGACTGCGT GGCTGAAGAT CGCGCTGGAG
GAGTTCAAGG CAAAGACGGG ATATGAGGTC GAGTTGCGGC AGTCCGACTG GGGCTCGGCT
TTCCAGAAGC TTCTGACTGC AACTGCCAGC GGTACGCTCG CCGATGTCTG CATGATGGGC
CAGGTGATGA CCCCTGCCCT CGCCTCCAAA GGAGCCTTCC TGCCGATCGA TTCCTATCTC
AAGGGCTGGG TGGACGCCGA ACAGTTCTAC GCGCCGATGC TGAAGGACGG CATTTTCGAC
GGCAAGTCCT ACGCTTTGCC GATCTATGCC GACGTGCGGA CTTCAATCTA CCGCTCCGAC
ATTCTCAAGA AGGCGGGCGT CGAGACTTTG CCGACGAACT GGGATGAGTT CAAGGCCTTG
GCCAAGAAAC TATCGACCAA GAATGGTGGT CCACTTGATG CGCCGTTCTT TGCCAATCAA
GACAAGTCGG TTGGCCTTAT GCAGACTTTC TCCCAGTTCC TGGTGCAGGC CGGCGGCAGC
TATTTCGATG AAAAGGGCAA GTCGATCCTT TCGGCCGAGC CCGGCCAAAA GGCGCTGAAC
TATCTCGTCT CGTTTTTTGC TGAAGGACTG GCAAATCCGA ATGTCGTCTA TCAGGGAACA
GGTCCGACTC CACTCGTGCA GGGACAAGCG GCGATGACGC TCAACAGCGT CTTCGAGCCG
CGCAATGCGC ATGCCAACAA TCCCGAAGTC GAGAAATTCG TCATTGCCGG CGCGCCGTTA
TCCGCCACTC CAGGCGGCAA GCCGGCCACG CTCGCCTGGA TCAACAAGCT CGGCATTGGC
GCCAACACGA AAGATCCGGA CGGCGCCTGG CAGCTGCTAT CCTATCTCGT GTCGAAATCT
TCGTCCGAAA AGTTCGCGGA ACTTTGGGGC GGCCTGCCCG CCCGCCAGGA TTTGAAGGAC
GCGCCCTTCC TTGCCAATGT CGACAAGGGC TTTGTTGACG CGACCCAATA TGCCGGCGCT
CTGCCGACCA CACCGAGCCT TCTGCAGATC CAGAAGGAGG TCAACATCGC AATGCAGTCG
GCGATACGCC AGGCTCAGCC ACCGGCTGAG ATCCTTTCCG CGCTCGACAC GAAGATCGAC
GAAATCACTG GTTCCTGA
 
Protein sequence
MTNLYHNVPR RSVLKGGFGL AVGLGVTLKA PAMLAQDKSL SLMVLGPDQK ATAWLKIALE 
EFKAKTGYEV ELRQSDWGSA FQKLLTATAS GTLADVCMMG QVMTPALASK GAFLPIDSYL
KGWVDAEQFY APMLKDGIFD GKSYALPIYA DVRTSIYRSD ILKKAGVETL PTNWDEFKAL
AKKLSTKNGG PLDAPFFANQ DKSVGLMQTF SQFLVQAGGS YFDEKGKSIL SAEPGQKALN
YLVSFFAEGL ANPNVVYQGT GPTPLVQGQA AMTLNSVFEP RNAHANNPEV EKFVIAGAPL
SATPGGKPAT LAWINKLGIG ANTKDPDGAW QLLSYLVSKS SSEKFAELWG GLPARQDLKD
APFLANVDKG FVDATQYAGA LPTTPSLLQI QKEVNIAMQS AIRQAQPPAE ILSALDTKID
EITGS