Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4065 |
Symbol | truB |
ID | 6982836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 4239720 |
End bp | 4240652 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643398795 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_002283553 |
Protein GI | 209551636 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAC CACGCAAACC CAAAGGCAGG CCGATTTCCG GCTGGCTGAT CCTCGACAAA CCGGTGGATT TCGGCTCGAC GGAAGCCGTT TCCAAGATCA AGTGGCTCTT TAAGGCGCAG AAGGCCGGTC ATGCCGGCAC GCTCGATCCG CTCGCCTCCG GCATGCTGCC GATCGCGCTC GGCGATGCGA CGAAGACCGT TCCCTATGTG ATGGACGGCC GGAAGATCTA TGAATTCACG GTCAGCTGGG GCGAAGAGAG GGCGACAGAC GATCTTGAAG GCGAAGTGAC CGCAAGCTCG GACAGCCGTC CCAGCGAACA GCAGATCCGC GATATCCTGC CCGGATATAT CGGCACCATC AGCCAGGTGC CGCCGCAGTT TTCGGCGATC AAGATATCGG GTGAACGCGC CTATGATCTG GCGCGCGAAG GCGAAACGGT CGAAATCCCC TCGCGCGAAG TCGATATCTT CCGGTTGACG CTGCTCGCCT GCCCGGATGC CAATAGCGCG CATTTCGAAG TGGAATGCGG CAAGGGCACC TATGTCCGGG CGCTCGCCCG CGATTTCGGC CGCGAGCTCG GCTGTTACGG CCACGTATCG GGTCTCAGGC GCACCTTCGT CGCGCCCTTT GCGGAAGAGG CGATGGTGCC GCTCGCGGAC CTCGTGGCAC TGGAGGCGAT CGAGGATATG GACGAGCGGC TTGCCGCCCT CGACGCGCTG CTGATCGACA CCTGCGAGGC GCTCTCAGCC CTGCCCCACC TCGTCATCAA CGACGACCAG GCGCACCGGC TGAAGATGGG CAACCCGATC CTCGTGCGCG GCCGCGATGC GCCGATTGCC GAAAGCGAAG CCTATGCCAC GGCCCGCGGC AGGCTGATCG CGATCGGTGA GATCGGCCAG GGCGAGTTTC GCCCGAAGCG GGTTTTTGCC TGA
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Protein sequence | MSKPRKPKGR PISGWLILDK PVDFGSTEAV SKIKWLFKAQ KAGHAGTLDP LASGMLPIAL GDATKTVPYV MDGRKIYEFT VSWGEERATD DLEGEVTASS DSRPSEQQIR DILPGYIGTI SQVPPQFSAI KISGERAYDL AREGETVEIP SREVDIFRLT LLACPDANSA HFEVECGKGT YVRALARDFG RELGCYGHVS GLRRTFVAPF AEEAMVPLAD LVALEAIEDM DERLAALDAL LIDTCEALSA LPHLVINDDQ AHRLKMGNPI LVRGRDAPIA ESEAYATARG RLIAIGEIGQ GEFRPKRVFA
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