| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4021 |
|---|
| Symbol | |
|---|
| ID | 6982791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 4191464 |
|---|
| End bp | 4193914 |
|---|
| Gene Length | 2451 bp |
|---|
| Protein Length | 816 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643398750 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_002283509 |
|---|
| Protein GI | 209551592 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGAC AATTACCGAA GACGGCGAAA GCCGTTGTCA TCGGCGGTGG CATCATCGGC
TGCTCGACAG CCTATCATCT CGGCAAGCTC GGCTGGACCG ATACCGTGCT GCTCGAGCGC
AAGAAGCTCA CATCCGGGAC CACCTTCCAT GCCGCCGGCC TTGTCGGCCA GCTGCGCACC
AGCGCTAATA TCACCCAGCT GCTCGGCTAT TCCGTTGATC TCTATAAGCG CCTTGAAGAG
GAAACCGGCC TCGGCACCGG CTGGAAAATG AATGGCGGCC TGCGCCTTGC CTGCAACGAG
GAGCGCTGGA CGGAGGTCAG GCGCCAGGCG ACCACCGCGC AGTCCTTCGG CCTCGAAATG
CAGTTGCTGA CGCCGCAGGA GGCCTTCGAT CTCTGGCCGC TGATGACGAC AGACGATCTC
GTCGGCGCCG CCTTCCTTCC CACAGACGGC CAGGCCAACC CCTCCGACAT CACCCAGGCG
CTGGCAAAGG GCGCCCGTTT GTCCGGCGTT TCGATCTTCG AGGATACCGA AGTTCTCGAT
CTCGAGATCG ACAAGGGACG AATCCGCGCC GTCGTCACGG CTGAAGGCCG CATCGAATGC
GAGCGGGTTG TCGTCTGCGC CGGCCAGTGG ACGCGCGCCT TCGCTGCCCG CTTCGGCGTC
AACGTACCTT TGGTCTCGGT CGAGCATCAA TATATCATCA CCGAATCCTT CGGCGTCCCC
TCGAACCTGC CGACGCTGCG CGATCCCGAT CGCCTGACCT ATTACAAGGA GGAGGTCGGC
GGCATCGTCA TGGGCGGCTA TGAGCCGAAC CCCATCGCCT GGGCGGAGAA AGGCATCCCC
GAGGGTTTCC ACTACACACT GCTCGACAGC AATTTCGATC ATTTCGAGCA GATCATGGAA
CAGGCGCTTG GCCGCGTTCC GGCGCTGGAG AATGTCGGCG TCAAACAGCT GCTGAACGGC
CCGGAAAGTT TCACGCCGGA TGGCAATTTC ATTCTCGGCG AGGCGCCGGA ACTGAAGAAT
TTCTTCGTCG GCGCCGGTTT CAACGCCTTC GGCATCGCCT CGGCCGGCGG TGCCGGCATG
GCGCTTGCCG AATGGGTGAC GAAGGGAGAG CCGCCCTACG ATCTCTGGCC GGTCGATATT
CGCCGTTTCG GCCGGCCGCA TTTCGATACC GACTGGGTGC GGACCCGCAC GCTCGAAGCC
TATGGCAAAC ACTACACCAT GGCTTGGCCG TTCGAGGAGC ATTCGAGCGG CCGCCCCTGC
CGCAAGTCGC CGCTCTATGA CCGGCTGAAG GCGCAGGGGG CCTGTTTCGG CGAAAAGCTC
GGCTGGGAGC GGCCGAACTG GTTTGCCGAT CTCTTCGCCA ACGAGGAGCC GCGGGATGTC
TACAGCTATA CCAGACAGAA CTGGTTTGAC GCCGTCGGCC GCGAGCATAA GGCGGTGCGC
GAGGCGGCGG TCATCTTCGA CCAGACCTCA TTCGCCAAAT TCGTGCTGAA GGGCAGGGAC
GCCGAGGCGG CACTCTCCTG GATTGCTTCC AACGATGTCG CAAGACCCGT GGGATCGCTC
ATCTACACGC AGATGCTGAA CGACAAGGGT GGCATCGAAT GCGACCTGAC CGTCGCCCGC
ATCGCCGAGG ACGAATATTA CATCGTCACC GGCACTGGTT TCGCCACCCA CGACTTCAAC
TGGATCGCCC GCAATATTCC GGCGGAGATG CATGCCGAAC TGGTCGATGT GACCTCATCC
TATTGCGTGC TGTCACTAAT GGGGCCGAAT GCGCGCGCTG TGCTGGAAAA GGTGACCGGC
AGCGACGTCT CCAATGCCGC CTTCCCCTTC GGCCAGGTCA GAACCATCGG CATATCGGGC
TGCCCGGTAC GGGCGCTACG CATCACCTAT GTCGGCGAGC TCGGTTATGA ACTGCATGTT
CCCATCGAAT ATGCGACCAC GGTCTATGAT CTGCTGATGG CATCAGGCGG CAAGCTCGGT
CTCGTCAATG CCGGCTACCG CGCCATCGAA AGCTGCCGCC TGGAAAAAGG GTATCGCGCC
TGGGGCTCCG ATATCGGCCC CGACCATACG CCTGTTGAAG CCGGCCTCGG CTGGGCGGTG
AAGATCAGGA AGAGCATTCC CTTCCGCGGG CGCGAAGCGA TTGAGCGCCA GCTCAAGGAG
GGTGTGAAGA AGCGCCTCGC CTGCTTCGTT CCCGAGGATC CCGATACCGT GCTGCTCGGC
CGCGAAACCA TCTATCGCAA CGGCAAACGT GTCGGCTGGC TATCGAGCGG CGGCTTCGGC
TATACGCTCG GCAAGCCAAT CGGCTACGGC TACATCCGCA ATGCCGACGG CGTGACGGAA
GATTTCATCC TCTCCGGCAC CTATGAACTC GATGTCGCCA GGGAGCGCAT CCCTTGCAAG
GTGTCGCTGG CGCCGCTTTA CGATCCTGGT ATGGTGCGGG TGAAGGCTTG A
|
|---|
| Protein sequence | MTRQLPKTAK AVVIGGGIIG CSTAYHLGKL GWTDTVLLER KKLTSGTTFH AAGLVGQLRT
SANITQLLGY SVDLYKRLEE ETGLGTGWKM NGGLRLACNE ERWTEVRRQA TTAQSFGLEM
QLLTPQEAFD LWPLMTTDDL VGAAFLPTDG QANPSDITQA LAKGARLSGV SIFEDTEVLD
LEIDKGRIRA VVTAEGRIEC ERVVVCAGQW TRAFAARFGV NVPLVSVEHQ YIITESFGVP
SNLPTLRDPD RLTYYKEEVG GIVMGGYEPN PIAWAEKGIP EGFHYTLLDS NFDHFEQIME
QALGRVPALE NVGVKQLLNG PESFTPDGNF ILGEAPELKN FFVGAGFNAF GIASAGGAGM
ALAEWVTKGE PPYDLWPVDI RRFGRPHFDT DWVRTRTLEA YGKHYTMAWP FEEHSSGRPC
RKSPLYDRLK AQGACFGEKL GWERPNWFAD LFANEEPRDV YSYTRQNWFD AVGREHKAVR
EAAVIFDQTS FAKFVLKGRD AEAALSWIAS NDVARPVGSL IYTQMLNDKG GIECDLTVAR
IAEDEYYIVT GTGFATHDFN WIARNIPAEM HAELVDVTSS YCVLSLMGPN ARAVLEKVTG
SDVSNAAFPF GQVRTIGISG CPVRALRITY VGELGYELHV PIEYATTVYD LLMASGGKLG
LVNAGYRAIE SCRLEKGYRA WGSDIGPDHT PVEAGLGWAV KIRKSIPFRG REAIERQLKE
GVKKRLACFV PEDPDTVLLG RETIYRNGKR VGWLSSGGFG YTLGKPIGYG YIRNADGVTE
DFILSGTYEL DVARERIPCK VSLAPLYDPG MVRVKA
|
|---|
| |