Gene Rleg2_3937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3937 
SymbolaroE 
ID6982701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp4087732 
End bp4088589 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content63% 
IMG OID643398660 
Productshikimate 5-dehydrogenase 
Protein accessionYP_002283425 
Protein GI209551508 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.538125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGATT CACGTGAAAC ATTCGGGCCG AAAGCGTTTG TCACGGGCTT TCCGGTCAAG 
CATTCGCGCT CGCCGTTGAT CCACGGATAT TGGCTGAAGA CGCTCGGCCT GCCAGGCAGC
TATCGCGCCC ATGAAGTGGC GCCCGAGGCC TTTGCCGATT TCATCGCTTC GCTGAAGGAT
GGCAGTTCCG GCTTTACCGG CGGCAATGTC ACCATTCCCC ACAAGGAACT GGCTTTCCGT
CTCGCCGACA AGCCAGACGA ACTATCGCAC GAGCTCGGCG CCTCGAACAC GCTTTGGCTG
GACGATGGCC TGCTGCATGC GACGAACACC GACGGCCGCG GCTTCACCGC CAATCTCGAC
GAACGCCATC CGGGCTGGGA CCGCCAGGAC ACGGCGGTCG TCTTTGGCGC CGGCGGCGCC
AGCCGGGCGA TCATCCAGGC GGTTCGTGAT CGTGGTTTCA AGACGATCCA CGTCGTCAAC
CGCACCGTCG AACGCGCCCG TGAACTGGCC GATCGCTTTG GCCCGAAAGT TCAGGCCCAC
CCGATCGGCG CCCTGGCCGA AGTGATGAAA GGCGCCGGTC TGTTCATCAA TACCACCTCG
CTCGGCATGG ATGGCGAGGC CGCACCCCAG CTCGATTTCA CCCCTCTTGC GGCTGAGGCC
GTCGTCACCG ATATCGTCTA TGTCCCCCTG AAGACGCCGA TCCTGGCGCA GGCGCAAGAG
CAGGGATTTC CGATCGTCGA TGGTCTCGGC ATGCTGCTGC ATCAGGCCGT GCCGGGATTC
GAAAAATGGT TCGGCAAGCG TCCTGCGGTC GACGCGGCGC TGCGCGCGCT GATCATCGCC
GATATGGAAG CACACTGA
 
Protein sequence
MGDSRETFGP KAFVTGFPVK HSRSPLIHGY WLKTLGLPGS YRAHEVAPEA FADFIASLKD 
GSSGFTGGNV TIPHKELAFR LADKPDELSH ELGASNTLWL DDGLLHATNT DGRGFTANLD
ERHPGWDRQD TAVVFGAGGA SRAIIQAVRD RGFKTIHVVN RTVERARELA DRFGPKVQAH
PIGALAEVMK GAGLFINTTS LGMDGEAAPQ LDFTPLAAEA VVTDIVYVPL KTPILAQAQE
QGFPIVDGLG MLLHQAVPGF EKWFGKRPAV DAALRALIIA DMEAH