Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3937 |
Symbol | aroE |
ID | 6982701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 4087732 |
End bp | 4088589 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643398660 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002283425 |
Protein GI | 209551508 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.538125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGATT CACGTGAAAC ATTCGGGCCG AAAGCGTTTG TCACGGGCTT TCCGGTCAAG CATTCGCGCT CGCCGTTGAT CCACGGATAT TGGCTGAAGA CGCTCGGCCT GCCAGGCAGC TATCGCGCCC ATGAAGTGGC GCCCGAGGCC TTTGCCGATT TCATCGCTTC GCTGAAGGAT GGCAGTTCCG GCTTTACCGG CGGCAATGTC ACCATTCCCC ACAAGGAACT GGCTTTCCGT CTCGCCGACA AGCCAGACGA ACTATCGCAC GAGCTCGGCG CCTCGAACAC GCTTTGGCTG GACGATGGCC TGCTGCATGC GACGAACACC GACGGCCGCG GCTTCACCGC CAATCTCGAC GAACGCCATC CGGGCTGGGA CCGCCAGGAC ACGGCGGTCG TCTTTGGCGC CGGCGGCGCC AGCCGGGCGA TCATCCAGGC GGTTCGTGAT CGTGGTTTCA AGACGATCCA CGTCGTCAAC CGCACCGTCG AACGCGCCCG TGAACTGGCC GATCGCTTTG GCCCGAAAGT TCAGGCCCAC CCGATCGGCG CCCTGGCCGA AGTGATGAAA GGCGCCGGTC TGTTCATCAA TACCACCTCG CTCGGCATGG ATGGCGAGGC CGCACCCCAG CTCGATTTCA CCCCTCTTGC GGCTGAGGCC GTCGTCACCG ATATCGTCTA TGTCCCCCTG AAGACGCCGA TCCTGGCGCA GGCGCAAGAG CAGGGATTTC CGATCGTCGA TGGTCTCGGC ATGCTGCTGC ATCAGGCCGT GCCGGGATTC GAAAAATGGT TCGGCAAGCG TCCTGCGGTC GACGCGGCGC TGCGCGCGCT GATCATCGCC GATATGGAAG CACACTGA
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Protein sequence | MGDSRETFGP KAFVTGFPVK HSRSPLIHGY WLKTLGLPGS YRAHEVAPEA FADFIASLKD GSSGFTGGNV TIPHKELAFR LADKPDELSH ELGASNTLWL DDGLLHATNT DGRGFTANLD ERHPGWDRQD TAVVFGAGGA SRAIIQAVRD RGFKTIHVVN RTVERARELA DRFGPKVQAH PIGALAEVMK GAGLFINTTS LGMDGEAAPQ LDFTPLAAEA VVTDIVYVPL KTPILAQAQE QGFPIVDGLG MLLHQAVPGF EKWFGKRPAV DAALRALIIA DMEAH
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