| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3931 |
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| Symbol | trmE |
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| ID | 6982695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 4081410 |
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| End bp | 4082723 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643398654 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002283419 |
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| Protein GI | 209551502 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.45905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCATG ATACGATCTA TGCGCTATCG AGCGGTGCCA CACCCTCAGG TGTGTCGGTC
GTTCGGATCA GCGGCCCGTT GACCAAAGAC ATATTGGTCG GGCTCGTCGG ATCAGTACCG
ACAGCCCGAT ATGCCGTACG GCGAACGATT CGGAATCGTA ACAACCAGCC GATCGACAGC
GGCCTCGTAT TGTTTTTTCC TGGGCCACAC TCGTTTACCG GCGAAGACGT CGCCGAACTG
CAGCTACATG GCAGCAAAGC CGTGCTGGCG GCGCTGTTTG AGGCCCTTTG TGAATTGCCA
GGCGTTCGGA TGGCGGTTGA GGGCGAGTTC TCCCGCCGCG CTTTTGAAAA TGGCAAGCTT
GATCTCGTCG AAGTCGAAGG CCTAGCCGAT CTTATCGGCG CGGAAACCGA GATGCAGCGG
CGTCTTGCGG TCGAACAGAG CGCAGGGGGG CTTTCCCTGA TTTACGATTC GTGGGCGGAA
CGATTAACGC GTGCCCGCGC GTTGATCGAG GCGGAACTTG ATTTTCCCGA CGAGGATGAT
GTTCCAGGCT CGGTATCCGA CATGGTCTGG GCTGAGATGG AAAGGCTGCG CCAAGATATC
GGGCAGCACC TCTCGGCAGC CTCGGCGGGA GAGATTATCC GGGACGGCTT CAAGGTGGTC
ATCGCCGGGG CGCCCAACGC AGGGAAATCC AGCCTGCTGA ACGCTCTCGC ACGACGCGAC
GTGGCGATTG TCACTGATAT CGCCGGAACT ACCCGCGATG TTCTGCAGGT CGATCTCGAC
ATTGATGGCT ACCTGGTCAA GCTCTATGAC ACGGCGGGTC TTCGTGAGGC GGATGACCGG
GTTGAAATGG AGGGCGTGCG GCGTGCACGT GTCGCGCTCC GTGATGCCGA TCTCGTCTTG
CTGCTGGTCG ACATGACGAA CCCCCTGCTC CCTGACGACT TGGACCAGGC TGCACCACAT
GTTACTGTCG GGACGAAGAA GGATCTTGTG GATGTCGTCT CGGGTCATTA CGACCTGCAG
ATCTCGACGG CAACGGGTGA AGGCTTGTCG GAATTGCGGC AGGTGATCGG CAACAGCGTC
GCCACGCGGT TTACCGGCCT CTCCATGGCT ATTCCGAGCC GCCAACGGCA TAAAGATTCG
CTGGCGAAAT GTTTGACGGC GCTTGAGATC GCCATCTCGG CGACGGATGT CAATCTCGAG
TTGCGCACTG AACAGCTTCG CATTGCTGCG GACTATTTGG GCAGAATTAC CGGCAGAGTG
GATGTTGAGC AGCTGCTCGG CGTGATCTTC TCAGAGTTTT GTATCGGCAA GTGA
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| Protein sequence | MLHDTIYALS SGATPSGVSV VRISGPLTKD ILVGLVGSVP TARYAVRRTI RNRNNQPIDS
GLVLFFPGPH SFTGEDVAEL QLHGSKAVLA ALFEALCELP GVRMAVEGEF SRRAFENGKL
DLVEVEGLAD LIGAETEMQR RLAVEQSAGG LSLIYDSWAE RLTRARALIE AELDFPDEDD
VPGSVSDMVW AEMERLRQDI GQHLSAASAG EIIRDGFKVV IAGAPNAGKS SLLNALARRD
VAIVTDIAGT TRDVLQVDLD IDGYLVKLYD TAGLREADDR VEMEGVRRAR VALRDADLVL
LLVDMTNPLL PDDLDQAAPH VTVGTKKDLV DVVSGHYDLQ ISTATGEGLS ELRQVIGNSV
ATRFTGLSMA IPSRQRHKDS LAKCLTALEI AISATDVNLE LRTEQLRIAA DYLGRITGRV
DVEQLLGVIF SEFCIGK
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