| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3632 |
|---|
| Symbol | |
|---|
| ID | 6982394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 3760765 |
|---|
| End bp | 3762543 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643398356 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | YP_002283123 |
|---|
| Protein GI | 209551206 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.377399 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGTC TAGCCTCCGA TTCGAAATAC ATTCTTGACG CCATCTCCAA ATCGCAGGCG
ATCATCGAAT TCGATCTCAA CGGCAATATT CTCACGGCGA ACGAGAATTT CTGCAACGCC
CTGGGTTATC GCCTCAACGA GATCGTCGGC AAGCATCACA GCATGTTCTG CGAACCGGCC
TACACGGCGA CGCCCGAATA TCGCGCCTTC TGGGCGCGGC TCGGACGCGG CGAATATGAT
GCCGGCGCCT ATAAGCGTCT TGCCAAGGGC AACAGGGAGA TATGGATCCA GGCGTCCTAT
AATCCCGTTT CCAAAGGCGG AAAGCCGTTC AAGGTGGTGA AATTCGCCGC CGACATCACA
GCGGCGAAAA AGCAGGCGGT CGAAGATTCC GGCAAACTGG AAGCGATCTC GCGCTCGCAG
GCAGTGATCG AATTCACCCC GAAGGGCGAC ATCCTGACTG CGAACGAGAA TTTCTGCCAG
GCCATGGGAT ATTCGCTGGC CGAAATCGCC GGCAAACATC ACAGCATCTT CTGCGACCCG
GCCCATACCC GCACCGAGGA ATACAGCAGC TTCTGGCGGC GTCTTGCCAA TGGCGAATTC
ATCGCCAACG AATTCGTCCG CTTCGGCAAG GGCGGCCGCG AAATCTGGAT CCAGGCAGCT
TATAACCCGA TCGTCGATGC CGACGGCAAA GTCTATAAAG TCGTGAAGTT CGCGACCGAC
GTCACCCAGC GGATGAGCGC GATTTCCCAG CTCGGCGGCG CGCTGCGCCA GCTTTCCGAA
GGTGATCTGA CGATGACGGT GGACACGCCC TTCGTCCCCT CGATGGAGCA GCTGCGCCAC
GACTTCAACA CTGCGGTCAA AGGTCTTGCC GATACGATGA AGACCATCGG CGAGAATGCC
GTTGCGATCG CCGCCGGGTC GAGCGAGATC GGTACATCGG CGGACTCCTT TTCCAAGCGG
ACGGAACAGC AGGCCGCGTC GATCGAAGAA ACCGCAGCCG CGCTGGAGGA GATCACCACC
ACCGTCAACG ATTCCAGTCG CCGCGCCGAT GAGGCGGGCC GCCTTGTCGC CGTGACCAAG
CAGGGCGCCG AGCAATCGGG CGTCGTGGTC CGCAACGCCG TCGCCGCCAT GGACCAGATC
GAGCAGTCCT CGCGCGAAAT CACCAATATC ATCGGCGTCA TCGACGATAT CGCCTTCCAG
ACCAATCTCC TGGCGCTGAA TGCCGGCGTC GAAGCCGCCC GCGCCGGCGA AGCCGGCAAG
GGTTTCGCTG TGGTGGCCCA GGAAGTCCGC GAGCTCGCCC AGCGCTCCGC CAAGGCGGCC
AAGGAGATCA AGGCGCTGAT CAATACGTCG AGCGAGCTCG TCAAAAACGG CGTCGGCCTC
GTCGGCCAGA CCGGCAAGGC GCTCGAGGAG ATCGTCACCC AGGTTGGCGA TATCAACGGC
AACGTCGTCG CCATCGTCGA AGCCTCACGG GAACAGGCAA CCGGCCTCAA GGAAATCAAC
CAGGCGGTCA ATTCGCTCGA CCAGGCAACC CAGCAGAATG CCGCCATGGT CGAGGAGAGC
ACCGCCGCCA GCCATAGCCT GGCAAAGGAA GCCGAAACGC TGCGGGTCCT GCTGGCACGG
TTCCGCCTGC CCGGTCAGAC CCGCACCCAG GCCGGGCCTC AGACCGCCGG CAGGCTGGAA
ACAAGACAGA CAGGCTCGCC GGCACTGCAT CTCGTTTCCC GCGTCGGCAA GGCGTACGGC
GCTGCCGCTG CAACGGCGCA GAGCTGGGAA GAGTTCTGA
|
|---|
| Protein sequence | MFGLASDSKY ILDAISKSQA IIEFDLNGNI LTANENFCNA LGYRLNEIVG KHHSMFCEPA
YTATPEYRAF WARLGRGEYD AGAYKRLAKG NREIWIQASY NPVSKGGKPF KVVKFAADIT
AAKKQAVEDS GKLEAISRSQ AVIEFTPKGD ILTANENFCQ AMGYSLAEIA GKHHSIFCDP
AHTRTEEYSS FWRRLANGEF IANEFVRFGK GGREIWIQAA YNPIVDADGK VYKVVKFATD
VTQRMSAISQ LGGALRQLSE GDLTMTVDTP FVPSMEQLRH DFNTAVKGLA DTMKTIGENA
VAIAAGSSEI GTSADSFSKR TEQQAASIEE TAAALEEITT TVNDSSRRAD EAGRLVAVTK
QGAEQSGVVV RNAVAAMDQI EQSSREITNI IGVIDDIAFQ TNLLALNAGV EAARAGEAGK
GFAVVAQEVR ELAQRSAKAA KEIKALINTS SELVKNGVGL VGQTGKALEE IVTQVGDING
NVVAIVEASR EQATGLKEIN QAVNSLDQAT QQNAAMVEES TAASHSLAKE AETLRVLLAR
FRLPGQTRTQ AGPQTAGRLE TRQTGSPALH LVSRVGKAYG AAAATAQSWE EF
|
|---|
| |