Gene Rleg2_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3567 
Symbol 
ID6982328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3694428 
End bp3695696 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content63% 
IMG OID643398292 
Productdiaminopimelate decarboxylase 
Protein accessionYP_002283060 
Protein GI209551143 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.67276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.379648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCATT TCGAGTACCG CGACGGCGTC CTGCATGCCG AAAACGTCCC CGTTCCCGAG 
ATCGCCAAGG CGGTCGGCAC GCCCTTCTAC GTCTATTCCA CCGCAACGCT GGAGCGCCAT
TACCGGGTTT TCTCCGAAGC CTTCGCCGAT ATGGACTCCA TGGTCTGCTA CGCGATGAAG
GCGAATTCGA ACCAGGCCGT GCTGAAGACG CTCGGCCGTC TCGGCGCCGG CATCGACGTC
GTCTCCGAAG GCGAGCTGCG CCGCGCGCTT GCCGCCGGCA TCCCGGCCAG CCGCATCATG
TTTTCAGGTG TCGGCAAGAC GCCGCAGGAA ATGGATTTCG CTCTTGAGGC AGGCATCTAC
TGCTTCAACG TCGAATCCGA GCCCGAGCTC GAAATCCTCA ACCAGCGCGC CGTCAAGGCC
GGGACGAAAG CCCCGGTCTC CTTCCGCATC AACCCCGATG TCGATGCGAA AACCCATTCG
AAGATTTCGA CCGGCAAGAA GGAAAACAAG TTCGGCATCT CCTGGGAGCG CGCGCGCGCC
ATCTATGCCC ATGCCGCCAG GCTGCCGGGC ATCGAGGTCA CCGGCATCGA CATGCATATC
GGCAGCCAGA TCACCGAATT GCAGCCCTTC GACGACGCCT TCAAACTGCT GCACGATCTT
GTCGCGACGC TGCGCGCCGA CGGCCACACG ATCGATCACG TCGATATCGG CGGCGGCCTC
GGCATTCCCT ATAAGGACGA CAACAATCCG CCGCCGCTGC CGGACGCCTA TGCGGCGATC
GTCAAGAACC AGCTGCGCGG CCTCAACTGC AAGATCATCA CCGAACCCGG CCGCCTGATC
GTCGGCAATG CCGGCATCCT GGTGACCGAA GTCCTCTATG TGAAGGACGG CGGCGAGAAG
ACCTTCGTCA TCGTCGACGG CGCGATGAAC GATCTGATCC GCCCGACCCT TTACGAGGCC
TATCACGAGA TCCGCCCGGT AACGATTTCG GCGGCGAACG CCCCGCGCAT CCGCGCCGAC
GTGGTCGGGC CGGTCTGCGA GACCGGCGAT TACCTGGCGC TCGACCGCGA GATGGCGATG
CCGAAGCCCG GCGACCTGAT CGCCGTCAGC ACGGCCGGCG CCTATGGCGC GGTGCAGGCC
GGCACCTATA ACAGCCGGCT GCTGGTGCCC GAGGTTCTGG TCAAAGGCAG CGATTTCCAT
ACGATTCGCC CGCGCAGAAC CTATGCCGAA CTGATCGGCC TCGACTCCGT TCCCGCCTGG
CTCGATTAA
 
Protein sequence
MNHFEYRDGV LHAENVPVPE IAKAVGTPFY VYSTATLERH YRVFSEAFAD MDSMVCYAMK 
ANSNQAVLKT LGRLGAGIDV VSEGELRRAL AAGIPASRIM FSGVGKTPQE MDFALEAGIY
CFNVESEPEL EILNQRAVKA GTKAPVSFRI NPDVDAKTHS KISTGKKENK FGISWERARA
IYAHAARLPG IEVTGIDMHI GSQITELQPF DDAFKLLHDL VATLRADGHT IDHVDIGGGL
GIPYKDDNNP PPLPDAYAAI VKNQLRGLNC KIITEPGRLI VGNAGILVTE VLYVKDGGEK
TFVIVDGAMN DLIRPTLYEA YHEIRPVTIS AANAPRIRAD VVGPVCETGD YLALDREMAM
PKPGDLIAVS TAGAYGAVQA GTYNSRLLVP EVLVKGSDFH TIRPRRTYAE LIGLDSVPAW
LD