Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3567 |
Symbol | |
ID | 6982328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 3694428 |
End bp | 3695696 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643398292 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002283060 |
Protein GI | 209551143 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.67276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.379648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACCATT TCGAGTACCG CGACGGCGTC CTGCATGCCG AAAACGTCCC CGTTCCCGAG ATCGCCAAGG CGGTCGGCAC GCCCTTCTAC GTCTATTCCA CCGCAACGCT GGAGCGCCAT TACCGGGTTT TCTCCGAAGC CTTCGCCGAT ATGGACTCCA TGGTCTGCTA CGCGATGAAG GCGAATTCGA ACCAGGCCGT GCTGAAGACG CTCGGCCGTC TCGGCGCCGG CATCGACGTC GTCTCCGAAG GCGAGCTGCG CCGCGCGCTT GCCGCCGGCA TCCCGGCCAG CCGCATCATG TTTTCAGGTG TCGGCAAGAC GCCGCAGGAA ATGGATTTCG CTCTTGAGGC AGGCATCTAC TGCTTCAACG TCGAATCCGA GCCCGAGCTC GAAATCCTCA ACCAGCGCGC CGTCAAGGCC GGGACGAAAG CCCCGGTCTC CTTCCGCATC AACCCCGATG TCGATGCGAA AACCCATTCG AAGATTTCGA CCGGCAAGAA GGAAAACAAG TTCGGCATCT CCTGGGAGCG CGCGCGCGCC ATCTATGCCC ATGCCGCCAG GCTGCCGGGC ATCGAGGTCA CCGGCATCGA CATGCATATC GGCAGCCAGA TCACCGAATT GCAGCCCTTC GACGACGCCT TCAAACTGCT GCACGATCTT GTCGCGACGC TGCGCGCCGA CGGCCACACG ATCGATCACG TCGATATCGG CGGCGGCCTC GGCATTCCCT ATAAGGACGA CAACAATCCG CCGCCGCTGC CGGACGCCTA TGCGGCGATC GTCAAGAACC AGCTGCGCGG CCTCAACTGC AAGATCATCA CCGAACCCGG CCGCCTGATC GTCGGCAATG CCGGCATCCT GGTGACCGAA GTCCTCTATG TGAAGGACGG CGGCGAGAAG ACCTTCGTCA TCGTCGACGG CGCGATGAAC GATCTGATCC GCCCGACCCT TTACGAGGCC TATCACGAGA TCCGCCCGGT AACGATTTCG GCGGCGAACG CCCCGCGCAT CCGCGCCGAC GTGGTCGGGC CGGTCTGCGA GACCGGCGAT TACCTGGCGC TCGACCGCGA GATGGCGATG CCGAAGCCCG GCGACCTGAT CGCCGTCAGC ACGGCCGGCG CCTATGGCGC GGTGCAGGCC GGCACCTATA ACAGCCGGCT GCTGGTGCCC GAGGTTCTGG TCAAAGGCAG CGATTTCCAT ACGATTCGCC CGCGCAGAAC CTATGCCGAA CTGATCGGCC TCGACTCCGT TCCCGCCTGG CTCGATTAA
|
Protein sequence | MNHFEYRDGV LHAENVPVPE IAKAVGTPFY VYSTATLERH YRVFSEAFAD MDSMVCYAMK ANSNQAVLKT LGRLGAGIDV VSEGELRRAL AAGIPASRIM FSGVGKTPQE MDFALEAGIY CFNVESEPEL EILNQRAVKA GTKAPVSFRI NPDVDAKTHS KISTGKKENK FGISWERARA IYAHAARLPG IEVTGIDMHI GSQITELQPF DDAFKLLHDL VATLRADGHT IDHVDIGGGL GIPYKDDNNP PPLPDAYAAI VKNQLRGLNC KIITEPGRLI VGNAGILVTE VLYVKDGGEK TFVIVDGAMN DLIRPTLYEA YHEIRPVTIS AANAPRIRAD VVGPVCETGD YLALDREMAM PKPGDLIAVS TAGAYGAVQA GTYNSRLLVP EVLVKGSDFH TIRPRRTYAE LIGLDSVPAW LD
|
| |