| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3460 |
|---|
| Symbol | |
|---|
| ID | 6982214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 3575963 |
|---|
| End bp | 3576787 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643398178 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_002282953 |
|---|
| Protein GI | 209551036 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCCG CCTCAACATC AAAGTCGCCC GTCCCGATCG GCGTGGCGCA CTTCTCGTCT
ATAATGCTGC CCCCCGCGGA GTTCGCGAAG ATTGCCAGAC GGGCAGGTTT CTCCAGGATC
GGCCTCAGGC TCCATCCAGC CTTTCCCGGT GCGCCGTATT ATGAACTGCC TGTCGGCAGC
GCAGCAGCCG CAGAGTTGAA GGCTGTGCTT GCCGGCGAAG ACGTCGAGGT CTTCGATATC
GAGTTCTTCG TGATCGATCC CGCTTTCGAC GCATCGTCAG TGGAGGCGAC CGTCGCAGCA
GCTGCGAATA TTGGAGCGCG TCGGCTCAGC GTCTGCGGTG ACGATCCGGA TCATGCCAGG
CTGCTATCGA ACTTTTCGGA TTTCTGCGTC CTCGCGGAAC GGTACGGGTT GGCGGTTGAT
ATCGAGAACA TGGGCTGGCG GGTTGTCAAA GCCTTTGCAG ATGGCATCGA CCTCGTGACC
GAGGCGGGGA TGGAGAATGC CGGCGTTCTC GTCGACGGCA TTCATTTCTT CAGGAACGGC
GCTGATCTGG CAGACTTGCG GGCCAACCTC GACAAAGTGA AGCACGTCCA ACTATGCGAC
GTGGCCGGTC CGGCGCCGAC GAAGCCGGAG GAAATGATCG CGGAAGCAAG AAGCGGCCGA
CTGCCTCCAG GGGAAGGCGA GTTGCCGTTG GACGATCTGG TTGCTGCGGT CGGCACCGCC
GCGTCCATTT CGGTGGAGGT GCCTTTGGTC GGATCCATGG CGCCAGAGGT CCACCTTAAA
CATCTTTTCG GCTGCGCGGA AAGAATGGTC GGACAGGATC GATAG
|
|---|
| Protein sequence | MMAASTSKSP VPIGVAHFSS IMLPPAEFAK IARRAGFSRI GLRLHPAFPG APYYELPVGS
AAAAELKAVL AGEDVEVFDI EFFVIDPAFD ASSVEATVAA AANIGARRLS VCGDDPDHAR
LLSNFSDFCV LAERYGLAVD IENMGWRVVK AFADGIDLVT EAGMENAGVL VDGIHFFRNG
ADLADLRANL DKVKHVQLCD VAGPAPTKPE EMIAEARSGR LPPGEGELPL DDLVAAVGTA
ASISVEVPLV GSMAPEVHLK HLFGCAERMV GQDR
|
|---|
| |