Gene Rleg2_3029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3029 
Symbol 
ID6981774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3088014 
End bp3089327 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content64% 
IMG OID643397739 
Productdihydropyrimidine dehydrogenase 
Protein accessionYP_002282522 
Protein GI209550605 
COG category[C] Energy production and conversion
[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase
[COG1144] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit 
TIGRFAM ID[TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00152592 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC TCCGCAATAA TTTCGTCGGC ATCAAGTCCC CGAACCCGTT CTGGCTGGCC 
TCTGCGCCGC CGACCGACAA GGCCTACAAC GTCGAGCGCG CCTTCAAGGC CGGCTGGGGC
GGCGTGGTCT GGAAGACGCT CGGCGAGGAA GGCCCGCCCG TCGTCAACGT CAACGGCCCG
CGCTACGGCG CGATCTTCGG CGCAGACCGC CGCCTGCTCG GCCTAAACAA TATCGAGCTC
ATCACCGACC GCGACCTCTA CACCAATCTC AGGGAAATGA AGCAGGTCAA GATGAACTGG
CCGGATCGGG CGCTGATCGC CTCGATCATG GTGCCCTGCG AGGAACAGGC CTGGAAGTCC
ATCCTGCCAC TCGTCGAAGA GACCGGCGCC GACGGAGTCG AACTGAATTT CGGCTGTCCG
CACGGCATGT CGGAGCGAGG GATGGGCTCA GCCGTCGGCC AGGTGCCGGA ATATATCGAA
ATGGTCGTGC GCTGGTGCAA GCAATACACC CGTATGCCCA TCATCACCAA GCTGACGCCC
AACATCACCG ACGTTCGCCG TCCTGCCCGC GCCGCCAAGG CCGGGGGCAC CGATGCCGTC
TCGCTGATCA ACACGATCAA TTCGATCGTA TCCGTCGATC TCGACAACTT CGCCCCCAAC
CCGACGGTCG GCGGCAAGGG CAGCCATGGC GGCTATTGCG GCCCGGCGGT CAAGCCGATC
GCCCTCAACA TGGTGGCCGA GATCGCCCGA GATCCCGAAA CCTACGGCCT GCCGATCTCC
GGCATCGGCG GCATCACCAC CTGGCGAGAC GCGGCTGAAT TCCTCGTTCT CGGCGCCGGC
AACGTCCAGG TCTGCACGGC CGCGATGACC TACGGCTTCA AGATCGTGCA GGAGATGATT
TCCGGCCTTT CCGACTGGAT GGACGAAAAA GGCCATCGCA GCCTCGACGA TATCACCGGC
CGCGCCGTGC CCAACGTCAC CGACTGGCAG TATCTGAACC TCAACTACAT CGCCAAGGCA
AAGATCGACC AGGATGCCTG CATCAAATGC GGCCGCTGCC ACATCGCCTG CGAGGACACC
TCGCATCAGG CGATCACCAA CGTCGTCAAC GGCCTGCGCC ATTTCGAGGT GATCGAGGAG
GAATGCGTCG GCTGCAATCT CTGCGTCAAC GTCTGCCCGG TCGAGAACTG CATCACCATG
GAGCCGCTTG CCGCCGGCAC CCTCGACAAG CGCACCGGCC GCACCGTCGA CCCGAACTAC
GCCAACTGGA CGACGCACCC GAACAACCCG ATGGCCCGCC AGGCGGCGGA GTGA
 
Protein sequence
MADLRNNFVG IKSPNPFWLA SAPPTDKAYN VERAFKAGWG GVVWKTLGEE GPPVVNVNGP 
RYGAIFGADR RLLGLNNIEL ITDRDLYTNL REMKQVKMNW PDRALIASIM VPCEEQAWKS
ILPLVEETGA DGVELNFGCP HGMSERGMGS AVGQVPEYIE MVVRWCKQYT RMPIITKLTP
NITDVRRPAR AAKAGGTDAV SLINTINSIV SVDLDNFAPN PTVGGKGSHG GYCGPAVKPI
ALNMVAEIAR DPETYGLPIS GIGGITTWRD AAEFLVLGAG NVQVCTAAMT YGFKIVQEMI
SGLSDWMDEK GHRSLDDITG RAVPNVTDWQ YLNLNYIAKA KIDQDACIKC GRCHIACEDT
SHQAITNVVN GLRHFEVIEE ECVGCNLCVN VCPVENCITM EPLAAGTLDK RTGRTVDPNY
ANWTTHPNNP MARQAAE