| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1908 |
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| Symbol | |
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| ID | 6980647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 1952174 |
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| End bp | 1953835 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643396631 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002281419 |
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| Protein GI | 209549502 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.834785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.122197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACG ACCTCTGGTA TAAGAACGCC GTCATCTACT GCCTCTCGGT CGAGACCTTC
ATGGATGCGA ACGGTGACGG CGTCGGTGAT TTTCAGGGGC TGATGCGGCG CCTCGATTAT
CTCTCCGGCC TTGGCGTGAC GGCGATCTGG TTGATGCCCT TCCAGACGTC GCCCGGCCGC
GACGACGGCT ATGATGTTTC CGACTATTAC AATGTCGACC CGCGCTATGG TTCGCTCGGC
GATTTCGTCG AGTTCACCCA TGGCGCCAAG CAGCGCGGTA TCCGCGTGCT GATCGACCTG
GTGATCAACC ACACCTCCAA GGACCATCCC TGGTTTCAAG GCGCCAGAAG CGACCCGCAC
TCACCCTATC GCGACTGGTA CGTCTGGTCT GAGAAAAAAC CTGCGAATGC CGATCAGGGC
ATGGTCTTCC CTGGCGTCCA GAAGACCACC TGGACCCATG ACGAAAAGGC CAGGGCCTAT
TATTTTCACC GCTTCTACGA CCACCAGCCC GATCTCAACA CCTCCAATCC CGAGGTGCAG
GCCGAGATCC TCAAGATCAT GGGCTTCTGG ATCCAGCTCG GCGTCTCCGG CTTCCGGATG
GATGCCGCCC CCTTCATCAT CGCGACGAAA GGCGCAGACG TTTCCAAGCC CGTCGAGCAG
TTCGACATGC TGAGGAAGTT TCGCGAATTC CTGCAATGGC GCCTGGGCGA TTCCATTATC
CTCGCCGAGG CCAATATCCT GCCGAAGGAC AATTTTGAAT ATTTCGGCAA CGACGGCGAC
CGCATGCAGA TGATGTTCAA TTTCCAGGTC AATCAGGCGC TGTTTTATGC TCTCGCCAGC
GCCGATACGC GGCCGCTGAA GAAGGCGATG GAGACGACGA AACCGCGCCC GGCCACCGCC
CAATGGGGTC TTTTTCTGCG CAATCACGAC GAACTGGATC TCGGCCGGCT GTCGGAAAAG
CAGCGCGGCG CGGTCTTTGC CGCCTTCGGA CCCGAAAAGG ACATGCAGCT TTACGACAGG
GGCATTCGCC GTCGGCTGGC GCCGATGCTC GGCGGCGACC GCCGCAGGAT CGAGATGGCT
TACAGCCTGC TGTTCTCGCT GCCCGGAACG CCTGTCATCC GCTACGGCGA CGAGATCGGC
ATGGGCGACG ATCTGACTTT GCCGGAGCGC AACTGCGCCC GCACGCCGAT GCAGTGGTCG
ACGGAACCGG AAGGCGGTTT CACCAAGAGT AGAAAGCCTG TTTCGCCTGT AATCAAGGAC
GGCCCCTACG GTTTCCAGCA TGTCAACGTC GCCGAGCAGC GGCGCGATCC CAATTCGCTG
CTGAACTGGA CCGAACGGAT GATCCGGATG CGCAAGGAAG CTCCGGAAAT CGGCTGGGGC
GACTTCGCTG TTGTCGATAC CGGGGACGAC GGGGTGCTGG CGCTTCGTTA CGACTGGCGC
GGCAATTCCG TGTTGATCCT GCACAATCTG CATGGGCAGC CGTCAGAAGT GACCTTCGAT
CCCGATGTCG GCGAAGACGG GCGGCAGCTG ATCGACATCG CCGATGGCGC CAGCAGCGAG
GCGGACGAGA AAGGCTTTCA TACCGTCAGG CTCGATGCCT ACGGCTACCG CTGGTATCGC
GTCGGAGGCC TAGACTATCT CCTCAGGCGC AGAGAAATTT AA
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| Protein sequence | MINDLWYKNA VIYCLSVETF MDANGDGVGD FQGLMRRLDY LSGLGVTAIW LMPFQTSPGR
DDGYDVSDYY NVDPRYGSLG DFVEFTHGAK QRGIRVLIDL VINHTSKDHP WFQGARSDPH
SPYRDWYVWS EKKPANADQG MVFPGVQKTT WTHDEKARAY YFHRFYDHQP DLNTSNPEVQ
AEILKIMGFW IQLGVSGFRM DAAPFIIATK GADVSKPVEQ FDMLRKFREF LQWRLGDSII
LAEANILPKD NFEYFGNDGD RMQMMFNFQV NQALFYALAS ADTRPLKKAM ETTKPRPATA
QWGLFLRNHD ELDLGRLSEK QRGAVFAAFG PEKDMQLYDR GIRRRLAPML GGDRRRIEMA
YSLLFSLPGT PVIRYGDEIG MGDDLTLPER NCARTPMQWS TEPEGGFTKS RKPVSPVIKD
GPYGFQHVNV AEQRRDPNSL LNWTERMIRM RKEAPEIGWG DFAVVDTGDD GVLALRYDWR
GNSVLILHNL HGQPSEVTFD PDVGEDGRQL IDIADGASSE ADEKGFHTVR LDAYGYRWYR
VGGLDYLLRR REI
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