Gene Rleg2_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1896 
Symbol 
ID6980635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1939910 
End bp1941151 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content62% 
IMG OID643396619 
Productcysteine desulfurase, SufS subfamily 
Protein accessionYP_002281407 
Protein GI209549490 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00682669 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAAGA TCGTGCCGGC CACGCCATAC GATGTCGAAG CCATCCGCCG GGATTTTCCG 
ATCCTGGCGG AGAAGGTGCA CGGCAAGCCG CTGGTCTATC TCGACAACGG CGCCTCGGCA
CAGAAGCCGC AGGTGGTGAT CGACGCCATC TCGCACGCCT ACGCCCATGA ATATGCCAAT
GTGCATCGCG GCCTGCACTA TCTCTCCAAT GCTGCGACGG ATGCCTATGA GGCGGCGCGC
GAGAAGGTGC GCCGTTTCCT CAACGCTCCT TCGGTCAACG ACATCGTCTT CACCAAGAAT
TCAACGGAAG CGATCAACAC CGTCGCCTAT GGCTGGGGCA TGCCCGAGAT CGGCGAGGGC
GACGAGATCG TCCTGACGAT CATGGAGCAT CATTCCAACA TCGTGCCCTG GCACTTCATC
CGTGAGCGGC AGGGTGCCAA ACTCGTCTGG GTGCCGGTCG ACGACGAGGG CGCCTTCCAT
ATCGAGGATT TCGAGAAGAG CCTGACGGAG CGCACCAAGC TCGTCGCCAT CACCCATATG
TCGAATGCGC TCGGCACGAT CGTTCCCGTC AAGGAAGTTT GCCGGATTGC GCATGAGCGC
GGCATCCCGG TGCTGATCGA CGGCAGCCAG GGCGCCGTGC ATCTGCCTGT CGACGTGCAG
GATATCGATT GCGACTGGTA TGTGATGACC GGCCACAAGC TCTACGGCCC GTCGGGCATC
GGCGTGCTTT ACGGCAAGAA GGAGCGGCTT TCCCAAATGC GCCCCTTCCA GGGCGGCGGC
GAGATGATTT TCGAAGTTGC CGAGGACGCG GTCACCTACA ATGATCCGCC GCACCGCTTC
GAGGCCGGCA CGCCGCCGAT CGTCCAGGCG ATCGGGCTCG GCTACGCGCT CGACTATATG
GAGAAGGTCG GCCGCGAGGC GATCGCCCGG CATGAGGCCG ATCTTGCCGC TTACGCTGTG
GAACGGCTGA AAACGGTCAA TTCGCTGCGC GTCTTCGGAA CGGCGCCCGA CAAGGGCAGC
ATCTTTTCCT TCGAGCTTGC CGGCATCCAT GCCCATGACG TCTCGATGGT GATCGACCGG
CAGGGCGTTG CGGTGCGAGC CGGCACGCAT TGCGCCATGC CGCTCTTGAA ACGCTTCGGC
GTCACCTCCA CATGCCGTGC ATCCTTCGGC ATGTACAATA CCCGCGCCGA GGTCGATGCC
CTGGCCGATG CGCTTGAATA TGCGCGCAAG TTCTTTGCTT GA
 
Protein sequence
MDKIVPATPY DVEAIRRDFP ILAEKVHGKP LVYLDNGASA QKPQVVIDAI SHAYAHEYAN 
VHRGLHYLSN AATDAYEAAR EKVRRFLNAP SVNDIVFTKN STEAINTVAY GWGMPEIGEG
DEIVLTIMEH HSNIVPWHFI RERQGAKLVW VPVDDEGAFH IEDFEKSLTE RTKLVAITHM
SNALGTIVPV KEVCRIAHER GIPVLIDGSQ GAVHLPVDVQ DIDCDWYVMT GHKLYGPSGI
GVLYGKKERL SQMRPFQGGG EMIFEVAEDA VTYNDPPHRF EAGTPPIVQA IGLGYALDYM
EKVGREAIAR HEADLAAYAV ERLKTVNSLR VFGTAPDKGS IFSFELAGIH AHDVSMVIDR
QGVAVRAGTH CAMPLLKRFG VTSTCRASFG MYNTRAEVDA LADALEYARK FFA