Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1884 |
Symbol | |
ID | 6980623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 1928953 |
End bp | 1929942 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643396607 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_002281395 |
Protein GI | 209549478 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0958449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0260992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGCA TAGAACATAT CAAGGTTGAA GCCGACGAAG CGGGCATGCG GCTCGATCGC TGGTTCAAGG TACATTTTCC CGGGCTCGGC TTCGGGCCGC TGCAGAAGCT TTTGCGCTCC GGCCAGGTGC GCGTCGACGG CGGCCGTGTC AAATCGGATG CGCGCGTGCA GCCCGGCCAG ACGGTGCGGG TGCCGCCGCT CGATGTCGAT GCGAAGAAGT CCGGGCCGAT CGCCGGCAAG GATCTCAAGC ATTCGTCCGA TTTCGAACTG CTGTCGCGCA TGGTGCTGCA TGAGGACGAT AAGGTGATCG TGCTCAACAA ACCACCCGGC ATTGCCGTGC AGGGCGGCTC CGGCGTGGCC CGCCATATCG ACCAGATGCT CGAAGCCTGG ACCAGCCCGA AGGGCGAAAA GCCTAGGCTC GTTCACCGCC TCGACCGCGA TACGTCAGGT GTTCTCGTGA TCGCCCGCAC CCGGGGCGCC GCACAGAAGC TGACCGCCGC TTTCCGCGAG CGCGACACCA AGAAGACTTA TTGGGCGCTG GTCAAGGGCG TGCCGCGCAA GCACGAGGAC AAGATCTCGA CCTGGCTCGT CAAGGAACCG ACAGCCGATG GCGACCGCAT GCGCATCGCC AAACACGGCG AGGACGGCGC CGATCATGCG ATTTCCTTCT ACCGCGTCAT CGAAACGGCC GCCCAAAACC TCGCTTGGCT GGAAATGGAA CCTTATACCG GCCGTACCCA CCAGCTGCGC GTCCATGCCC TGCATATCGG CCATCCGATC ATCGGCGATC CGAAATATTT CGACGACGAT CCGAACTGGG ATTTTCCGGG CGGCGTCCAG AAGAAGCTGC ATCTGCACGC GCGCCATATC GACATCCCGC ACCCATCCGG CGGCCGCCTG CGCGTCAGCG CACCGCTGCC ACCGCATATG GTGCAGACCT GGAACCTTCT CGGTCTCGAC CTTGCCGGCG CCGAAAGGGA CAGCGAATGA
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Protein sequence | MAGIEHIKVE ADEAGMRLDR WFKVHFPGLG FGPLQKLLRS GQVRVDGGRV KSDARVQPGQ TVRVPPLDVD AKKSGPIAGK DLKHSSDFEL LSRMVLHEDD KVIVLNKPPG IAVQGGSGVA RHIDQMLEAW TSPKGEKPRL VHRLDRDTSG VLVIARTRGA AQKLTAAFRE RDTKKTYWAL VKGVPRKHED KISTWLVKEP TADGDRMRIA KHGEDGADHA ISFYRVIETA AQNLAWLEME PYTGRTHQLR VHALHIGHPI IGDPKYFDDD PNWDFPGGVQ KKLHLHARHI DIPHPSGGRL RVSAPLPPHM VQTWNLLGLD LAGAERDSE
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