Gene Rleg2_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1838 
Symbol 
ID6980576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1888011 
End bp1889207 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content64% 
IMG OID643396560 
Productprotein of unknown function UPF0118 
Protein accessionYP_002281349 
Protein GI209549432 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00200619 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0419691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGTGT TCGACCGTCA GAAAAGCAAT CATGAACCAC GATGGCTCGG ATCATCGGCG 
CCGACACGGA CGCCGCTGAT ACCCTCCATC TCGGCGGCGC GCTGGCTGCT GGTTCTGGTC
GTTGCGGCGG GCGTTTACTT CTTCTACGGT TTCCTCGTGC CGGTGCTGGC AGCCCTGGTC
ATCGGCTTCG CCAGCTGGCC GCTCTACCGC AAGCTGCTTG CCCGCGTCGG CGGCAATACG
ACGATCGCCG CGACGATCGC CATCATCATG ATCATCACTT TCCTGGTCAT CCCGATCGGG
CTTGCGATCA CCTATACGAC GGGTGAAGTG CGCACCTGGG TTGCCTGGGC AATCCATGCC
AACCGCGCCG GCGCCCCGAC ACCGGCCTGG ATCGTCGCCC TGCCATGGGC CGGCGCCTAT
CTCGATGAAG TCTGGACCAA ATATATCGGC AGCCCCGGCG CCCTGGGCGA AGTGATACAG
GCGGTCAGCG GCGCCAATAT CGGCAATATC TACCGTGCCG TGCTTGCGGC CGGCGGTGGC
GCCTTCCACC TCCTGCTGAC GCTGCTCTTC ATGCTGATCG CGCTGTTCTT CGTCTATCGC
GACGGTTTTT CCTTCTCCAA GCAGATCGAC ATGCTCGGCG AGCGCATCCT GCCAAACCGC
TGGGAGCGCA TTTCCCGCGT CGTGCCGGCA ACGATCAGCT CCACCGTCAT GGGCATGACG
CTGATTGCGA TCGGCGAAGG CATCGTGCTC GGCCTGGCTT ACTGGATCGC CGGCGTGCCC
TCGCCCGTCA CGCTCGGCGT GTTGACGGGC GTGATGGCGC TGATACCGGG CGGCGCACCG
CTTTCCTTCA CGCTGGTCTC AATCTATCTC TTGGCAAGCG GCTCGCATGT CGCCGGCATC
GGTCTTTTCG TCTGGGGAAC GGTCGAGCTC TTCATAGTCG ACAAGACGTT GCGGCCGAAG
CTCGTCGGCG GTCCGATCAA GCTGCCCTTC CTGCCGACCT TCTTCGGTCT CGTCGGCGGC
GTCAAGACGA TGGGCTTCCT CGGCCTCTTC ATTGGCCCGG TGCTGATGGC GCTGATCGTC
GCCATCTGGC GCGAATGGAT CCACGAGGCC CGCAACGCCG AAAAGGGCGA GACGGGACCG
CAGGTCCTCA TCGACGAGCA AGCCCCGCCG GCAATCCCCC GTATCGCCGA AGGCTGA
 
Protein sequence
MGVFDRQKSN HEPRWLGSSA PTRTPLIPSI SAARWLLVLV VAAGVYFFYG FLVPVLAALV 
IGFASWPLYR KLLARVGGNT TIAATIAIIM IITFLVIPIG LAITYTTGEV RTWVAWAIHA
NRAGAPTPAW IVALPWAGAY LDEVWTKYIG SPGALGEVIQ AVSGANIGNI YRAVLAAGGG
AFHLLLTLLF MLIALFFVYR DGFSFSKQID MLGERILPNR WERISRVVPA TISSTVMGMT
LIAIGEGIVL GLAYWIAGVP SPVTLGVLTG VMALIPGGAP LSFTLVSIYL LASGSHVAGI
GLFVWGTVEL FIVDKTLRPK LVGGPIKLPF LPTFFGLVGG VKTMGFLGLF IGPVLMALIV
AIWREWIHEA RNAEKGETGP QVLIDEQAPP AIPRIAEG