Gene Rleg2_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1770 
Symbol 
ID6980507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1810819 
End bp1812036 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content67% 
IMG OID643396492 
ProductABC transporter related 
Protein accessionYP_002281282 
Protein GI209549365 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0636101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00357448 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGCGC TCTCGCTTCG CGGCATCACC AAGGCCTTCG GCGGCAACCA GATCCTCAAT 
GGCGTCAGCC TCGATGTCGG CGCCGGCGAA TTCATCGCGC TGGTCGGCCC TTCCGGCTGC
GGCAAGAGCA CGCTGCTGCG CGTCCTGGCC GGCCTCGACC ATGCCGATCA TGGCGAAATC
CTGATCGGCG GACGGGATAT GTCCGGCGTC GCGGCTGCCG ACCGCAACAT TGCCATGGTC
TTTCAGTCCT ACGCGCTCTA TCCGCATCTG ACGGCCGCTG AAAATATCGC CGTGCCGCTG
GCGATGCGGC GGCTGTCGAG AACAGAGCGG CTGCCTTTTA TCGGATCGCT GGTTCCAGGT
CAGCGTGCTA CCCGCGCGGC GATCGCCCGC GATGTCAGGG AAATGGCGAC ATCGCTGAAG
ATCGACCATC TACTCGACCG CAAGCCCGGC CAGATGTCGG GCGGTCAGCG CCAGCGCGTG
GCGCTCGCCC GCGCCATGGT GCGCCGGCCG AGCATCTTCC TGATGGACGA GCCGCTGTCC
AACCTCGACG CCAACCTGCG TGTCCACGCC CGCGGCGAGA TCGTCGAACT GCATCGCCGC
GCCGGCGTGC CGACGCTCTA TGTCACCCAT GACCAGGCGG AAGCGCTGTC GATGGCCGAC
CGTGTCGCCG TGATGATGGG CGGCCGATTG CTGCAGATCG CAAGTCCTGA GGTCATCTAC
GACGATCCGG CCCATATCGA GGTCGCCCGC TTCATCGGCC AGCCGCGCAT CAACCTGCTT
CCGGCCTTTG CCGAAGGCGG CGTCGTTCTC TGCGGCGGCC TGCGGCTGAC GCTGGAAAAT
GCGCCTGACA GGAAGAGGCC GGTGACGCTC GCCATTCGCC CGGAATTCGT CTTTCTCGCC
AAGAGCCGGC ATGACGGCCT TGCCGCCCGG ATCGAACGCG TCGAATTTCT GGGGTCCGAA
GTCATCCTCC ATTGCCGGCT CGACGCGATC GGCGAGACTA TCATCGCCAA GGTACAGCCG
TCCGAAGCCT CCGGGCTTGC AGCCGGGGAT GCCGTGGGGC TGCGATTGTC GCCTGGCCGC
ACGCTGATCT CTGCCGAGGA CGGCAGCCGG CTGGCCGGCT TTGTCGCCGG TGGCGATGCC
GGGCTCAGCG CCGCTGATGC CGGGCTCGCC GGTACCGATA CCAATGCCGA TGCCGAGCGG
GAGAGGGCGC ATGGCTAG
 
Protein sequence
MSALSLRGIT KAFGGNQILN GVSLDVGAGE FIALVGPSGC GKSTLLRVLA GLDHADHGEI 
LIGGRDMSGV AAADRNIAMV FQSYALYPHL TAAENIAVPL AMRRLSRTER LPFIGSLVPG
QRATRAAIAR DVREMATSLK IDHLLDRKPG QMSGGQRQRV ALARAMVRRP SIFLMDEPLS
NLDANLRVHA RGEIVELHRR AGVPTLYVTH DQAEALSMAD RVAVMMGGRL LQIASPEVIY
DDPAHIEVAR FIGQPRINLL PAFAEGGVVL CGGLRLTLEN APDRKRPVTL AIRPEFVFLA
KSRHDGLAAR IERVEFLGSE VILHCRLDAI GETIIAKVQP SEASGLAAGD AVGLRLSPGR
TLISAEDGSR LAGFVAGGDA GLSAADAGLA GTDTNADAER ERAHG