Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1770 |
Symbol | |
ID | 6980507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1810819 |
End bp | 1812036 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643396492 |
Product | ABC transporter related |
Protein accession | YP_002281282 |
Protein GI | 209549365 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0636101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00357448 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAGCGCGC TCTCGCTTCG CGGCATCACC AAGGCCTTCG GCGGCAACCA GATCCTCAAT GGCGTCAGCC TCGATGTCGG CGCCGGCGAA TTCATCGCGC TGGTCGGCCC TTCCGGCTGC GGCAAGAGCA CGCTGCTGCG CGTCCTGGCC GGCCTCGACC ATGCCGATCA TGGCGAAATC CTGATCGGCG GACGGGATAT GTCCGGCGTC GCGGCTGCCG ACCGCAACAT TGCCATGGTC TTTCAGTCCT ACGCGCTCTA TCCGCATCTG ACGGCCGCTG AAAATATCGC CGTGCCGCTG GCGATGCGGC GGCTGTCGAG AACAGAGCGG CTGCCTTTTA TCGGATCGCT GGTTCCAGGT CAGCGTGCTA CCCGCGCGGC GATCGCCCGC GATGTCAGGG AAATGGCGAC ATCGCTGAAG ATCGACCATC TACTCGACCG CAAGCCCGGC CAGATGTCGG GCGGTCAGCG CCAGCGCGTG GCGCTCGCCC GCGCCATGGT GCGCCGGCCG AGCATCTTCC TGATGGACGA GCCGCTGTCC AACCTCGACG CCAACCTGCG TGTCCACGCC CGCGGCGAGA TCGTCGAACT GCATCGCCGC GCCGGCGTGC CGACGCTCTA TGTCACCCAT GACCAGGCGG AAGCGCTGTC GATGGCCGAC CGTGTCGCCG TGATGATGGG CGGCCGATTG CTGCAGATCG CAAGTCCTGA GGTCATCTAC GACGATCCGG CCCATATCGA GGTCGCCCGC TTCATCGGCC AGCCGCGCAT CAACCTGCTT CCGGCCTTTG CCGAAGGCGG CGTCGTTCTC TGCGGCGGCC TGCGGCTGAC GCTGGAAAAT GCGCCTGACA GGAAGAGGCC GGTGACGCTC GCCATTCGCC CGGAATTCGT CTTTCTCGCC AAGAGCCGGC ATGACGGCCT TGCCGCCCGG ATCGAACGCG TCGAATTTCT GGGGTCCGAA GTCATCCTCC ATTGCCGGCT CGACGCGATC GGCGAGACTA TCATCGCCAA GGTACAGCCG TCCGAAGCCT CCGGGCTTGC AGCCGGGGAT GCCGTGGGGC TGCGATTGTC GCCTGGCCGC ACGCTGATCT CTGCCGAGGA CGGCAGCCGG CTGGCCGGCT TTGTCGCCGG TGGCGATGCC GGGCTCAGCG CCGCTGATGC CGGGCTCGCC GGTACCGATA CCAATGCCGA TGCCGAGCGG GAGAGGGCGC ATGGCTAG
|
Protein sequence | MSALSLRGIT KAFGGNQILN GVSLDVGAGE FIALVGPSGC GKSTLLRVLA GLDHADHGEI LIGGRDMSGV AAADRNIAMV FQSYALYPHL TAAENIAVPL AMRRLSRTER LPFIGSLVPG QRATRAAIAR DVREMATSLK IDHLLDRKPG QMSGGQRQRV ALARAMVRRP SIFLMDEPLS NLDANLRVHA RGEIVELHRR AGVPTLYVTH DQAEALSMAD RVAVMMGGRL LQIASPEVIY DDPAHIEVAR FIGQPRINLL PAFAEGGVVL CGGLRLTLEN APDRKRPVTL AIRPEFVFLA KSRHDGLAAR IERVEFLGSE VILHCRLDAI GETIIAKVQP SEASGLAAGD AVGLRLSPGR TLISAEDGSR LAGFVAGGDA GLSAADAGLA GTDTNADAER ERAHG
|
| |