Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1589 |
Symbol | |
ID | 6980325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 1613305 |
End bp | 1614432 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643396314 |
Product | membrane-associated zinc metalloprotease |
Protein accession | YP_002281105 |
Protein GI | 209549188 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATGGCCG ATATATACAC ATTCCTGATG GGGAATATCG TCACCTTCAT CCTCGTGCTC TCACTGCTCG TCTTCGTGCA CGAGATGGGC CACTACCTCG TCGGACGCTG GAGCGGCATC CGCATCCTTG CCTTCTCTGT CGGTTTCGGT CCCGAGATAT TCGGCTTCAA CGACCGCCAC GGAACGCGCT GGAAGATCTC GGTGATCCCG CTTGGCGGTT ACGTCCGTTT CTTCGGCGAC GAAGACGCGT CGAGCAAGCC CGACAGCGAC AAGCTCGCCG CCATGTCCGA GGAGGACAGG GCGCGCTCCT TTGCCGGCGC AAAACTGTGG AAACGTGCTG CGACCGTCGC CGCCGGCCCG ATCGCCAATT TCCTGCTGGC GATTGCCATC TTTACCCTTC TTTTCTCGAT CTACGGCCGT TCCGTCGCCG ATCCCGTCGT GTCCGAAGTC ACGCCGGATG GTGTGGCGGC CGCCGCCGGC ATCCTTCCGG GCGATCTGCT GGTCGCCATC GACGGCGGCA AGGTCGAGAC CTTCGACGAC GTGCGCCGCT ATGTCGCCAT CCGCCCGAGC CAGCAGATCG TCGTCACCAT CGAGCGGGGC GGCCAAAAGC TGGACTTGCC GATGGTGCCG CAACGCGTCG ACAGGACCGA CCAGTTCGGC AACAAGATCG AAGTCGGCCA GATCGGTATC GTCACCAGCA AGGAAGTCGG CAATTTCCGC CTGCAGACGT ACACGCCGCT CCAGGCGCTG CGCGAAAGTG TGATCGAAAC CCGGGATATC GTCACCGGCA CATTCAAATA TATCGGCAAT ATTTTCCGCG GTACGATGCG GGCCGATCAA CTGGGTGGGC CGATCCGCGT TGCGCAAGCC TCGGGCCAGA TGGCTTCGCT TGGGATAGGG GCAGTGTTGC AGCTTGCCGC CATGCTTTCA GTTTCGATAG GATTGCTTAA CCTGATGCCG GTTCCGGTAC TTGATGGCGG CCACCTGATG TTCTATGCGG TGGAAGCGGT CAGAGGAAAA CCGCTGGGCG CCAAGGCTCA GGAAATCGCA TTTCGCATTG GCTTGGCCAT GATACTAACA TTGATGGTTT TCACGACCTG GAACGACGTT GGCGCGATCA GAGGGTAA
|
Protein sequence | MMADIYTFLM GNIVTFILVL SLLVFVHEMG HYLVGRWSGI RILAFSVGFG PEIFGFNDRH GTRWKISVIP LGGYVRFFGD EDASSKPDSD KLAAMSEEDR ARSFAGAKLW KRAATVAAGP IANFLLAIAI FTLLFSIYGR SVADPVVSEV TPDGVAAAAG ILPGDLLVAI DGGKVETFDD VRRYVAIRPS QQIVVTIERG GQKLDLPMVP QRVDRTDQFG NKIEVGQIGI VTSKEVGNFR LQTYTPLQAL RESVIETRDI VTGTFKYIGN IFRGTMRADQ LGGPIRVAQA SGQMASLGIG AVLQLAAMLS VSIGLLNLMP VPVLDGGHLM FYAVEAVRGK PLGAKAQEIA FRIGLAMILT LMVFTTWNDV GAIRG
|
| |