| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1452 |
|---|
| Symbol | |
|---|
| ID | 6980180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 1475805 |
|---|
| End bp | 1478255 |
|---|
| Gene Length | 2451 bp |
|---|
| Protein Length | 816 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643396173 |
|---|
| Product | nitrite reductase (NAD(P)H), large subunit |
|---|
| Protein accession | YP_002280972 |
|---|
| Protein GI | 209549055 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.116537 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.910407 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA AACTCGTCAT CATCGGCAAT GGCATGGCGC CCGGGCGCAT GCTGGAGCAC
CTCTTCGAAC GGGCGCCCGG ACGCTATGAA GTCACGATCT TCAATGCCGA GCCGCGCGTC
AATTACGACC GCATCATGCT GTCGCCGGTT CTCTCGGGAG AAAAGGACTA CGAGCAGATC
ATCATTCACG GTGACGGCTG GTACATCAAG CACGGCATCA TGCTCTACAA GGGCCACAAG
ATCGTCAACA TCGATCGCGA TGCCAAGACG GTCACCTCCG ATCATGGCGT CACCGAAAGC
TACGACAAGC TGGTGATCGC CACCGGTTCC GTGCCCTTCA TCATCCCGGT TCCCGGCAAG
GACCTGCCCG GCGTCATTAC CTATCGCGAT CTCGACGACG TGCAGGCCAT GCTGCTTGCC
GCCCAGTCGC GCGAAAAGGC CGTCGTCATC GGCGGCGGTC TTTTGGGCCT CGAAGCGGCG
GCCGGCCTTG CCCAGCGCGG CATGGACGTC ACCGTCCTGC ACGTCATGCC GACGCTGATG
GAGCGCCAGC TCGATCCCGC CGCCGGTTAT CTCTTGCAAA AGGCGGTCGA AGAACGCGGC
ATCAAGGTCA TCTGCAAGGC CAATACCAAG GCGATCATCG GCAACGGCAA GGTCGAAGGC
ATCGAACTCG ACGACGGCCG CATCATCCCG GCAACCCTCG TCGTCATGGC CGTCGGCATT
CGTCCGAGTG TTGGCCTGGC GAAGGACGCC GGCCTTGCGG TCAATCGCGG CATCGTCGTC
GATGCCGGCA TGCAGACTTC GGATGGCGAC ATCTTTGCGC TCGGCGAATG CGCCGAGGTC
GGCGGCATGG TCTACGGCCT CGTCGCCCCG CTCTACGAGA TGGCCCGCAT TGCCGCGGCA
CATCTCTCGG ACGACCGTTC GCCGGCTTTC GTGCATGCGG ACACGCCGAC CAAGCTGAAG
GTCACCGGCA TCGAGCTCTA TTCGCTCGGT GATTTCGCCG ATGGCGACGA CCGCGAGGAG
ATCGTGCTGC GTGACGCCAG CGCCGGCGTC TACAAGCGTC TCGTGCTGAA GGACAACAAG
ATCATCGGCA CCGTGCTTTA CGGCGAGACC GCCGACGGCG CCTGGTTCAA CGATCTGAAG
AAGAAGGCGA CCGATATTTC GGAGATGCGC GAGACGCTGA TCTTCGGTCA GGCCTATCAG
GGAGGGTCGC CGCTGGACCC TATGGCGGCC GTTGCAGCCT TGCCGGATGA CGCGGAGATT
TGTGGCTGCA ACGGCGTATG CAAGGGCAAG ATTACCTCGA CGATCACCAG CAAAGGCCTC
ACGTCGCTCG ACGACGTGCG CGCCCATACC AAGGCATCCG CCTCCTGCGG CTCCTGCACC
GGCCTTGTCG AACAGCTGAT GGCGCTGACC CTCGGCGATG GCTACAATCC GGCTGCCGTG
CAGCCGATGT GCACCTGCAC CGAACTCGGC CATGACGACG TTCGCCGCCT GATCAAGGCC
AAGGGTCTGA AGAGCATCCC GGCCGTCATG CAGGAATTGG AATGGAAGAC CTCTTGCGGC
TGCGCCAAGT GTCGGCCGGC GCTCAATTAT TACCTCGTGT GCGACTGGCC GGACGAATAT
GCCGACGACT ATCAGTCGCG CTTCATCAAT GAGCGTGTCC ACGCCAACAT CCAGAAGGAC
GGCACCTATT CCGTCGTTCC CCGCATGTGG GGCGGCGTCA CCAATTCGAA CGAGTTGCGC
GCCATCGCCG ATGTCGTCGA CAAGTTCGAG ATCCCGATGG TGAAGGTGAC GGGCGGCCAG
CGCATCGACC TGCTCGGCAT CGAGAAGGAA GATCTGCCCG CCGTCTGGGC CGATCTCGGC
AAGGCCGGTT TCGTCTCCGG CCAGGCCTAT GCCAAGGGCC TGCGCACGGT GAAGACCTGC
GTCGGTTCGG ACTGGTGCCG CTTCGGCACG CAGGATTCCA CCGGTCTCGG CATCCGCATC
GAGAAATTCA TGTGGGGCTC GTGGACGCCG GCCAAGCTGA AGATGGCCGT CTCCGGCTGC
CCGCGCAATT GCGCCGAAGC AACCTGCAAG GATATCGGCG TGATCTGCGT GGATTCCGGT
TTCGAGATCC ATTTCGCCGG TGCGGCCGGT CTCGACATCA AGGGCACCGA GGTGCTCGGC
CTGGTGAAGA CCGAGGACGA GGCGCTGGAG CATATCGTGG CGCTGACGCA AATGTATCGC
GAGCAAGCCC GCTATCTCGA GCGCATCTAC AAATGGGCCA AGCGCGTCGG ACTGGAGGAA
ATCCGCCGCC AGATCATGGG CGATGCCGAA AAGCGCAAGG CCTATTACGA GCGCTTCGTC
TTCAGCCAGA AATTTGCCCA GGTCGATCCC TGGTCGGAGC GCGTCTCCGG CAAGGACAAG
CATGAATTCA AGCCGATGGC GACGATCGGC TATCCGCAGG CAGCCGAGTA A
|
|---|
| Protein sequence | MTEKLVIIGN GMAPGRMLEH LFERAPGRYE VTIFNAEPRV NYDRIMLSPV LSGEKDYEQI
IIHGDGWYIK HGIMLYKGHK IVNIDRDAKT VTSDHGVTES YDKLVIATGS VPFIIPVPGK
DLPGVITYRD LDDVQAMLLA AQSREKAVVI GGGLLGLEAA AGLAQRGMDV TVLHVMPTLM
ERQLDPAAGY LLQKAVEERG IKVICKANTK AIIGNGKVEG IELDDGRIIP ATLVVMAVGI
RPSVGLAKDA GLAVNRGIVV DAGMQTSDGD IFALGECAEV GGMVYGLVAP LYEMARIAAA
HLSDDRSPAF VHADTPTKLK VTGIELYSLG DFADGDDREE IVLRDASAGV YKRLVLKDNK
IIGTVLYGET ADGAWFNDLK KKATDISEMR ETLIFGQAYQ GGSPLDPMAA VAALPDDAEI
CGCNGVCKGK ITSTITSKGL TSLDDVRAHT KASASCGSCT GLVEQLMALT LGDGYNPAAV
QPMCTCTELG HDDVRRLIKA KGLKSIPAVM QELEWKTSCG CAKCRPALNY YLVCDWPDEY
ADDYQSRFIN ERVHANIQKD GTYSVVPRMW GGVTNSNELR AIADVVDKFE IPMVKVTGGQ
RIDLLGIEKE DLPAVWADLG KAGFVSGQAY AKGLRTVKTC VGSDWCRFGT QDSTGLGIRI
EKFMWGSWTP AKLKMAVSGC PRNCAEATCK DIGVICVDSG FEIHFAGAAG LDIKGTEVLG
LVKTEDEALE HIVALTQMYR EQARYLERIY KWAKRVGLEE IRRQIMGDAE KRKAYYERFV
FSQKFAQVDP WSERVSGKDK HEFKPMATIG YPQAAE
|
|---|
| |