| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1324 |
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| Symbol | rpoB |
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| ID | 6980052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 1348360 |
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| End bp | 1352499 |
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| Gene Length | 4140 bp |
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| Protein Length | 1379 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643396045 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002280844 |
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| Protein GI | 209548927 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.347511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGA CCCTTTCGTT CAATGGTCGT AGGCGCGTAC GCAAGTTTTT TGGTAAGATC
CCCGAAGTCG CAGAAATGCC GAACCTCATC GAGGTTCAGA AGGCGTCCTA CGACCAGTTT
TTGATGGTTG AAGAGCCGAA AGGCGGCCGG CCCGACGAGG GCCTTCAGGC CGTTTTCAAG
TCGGTTTTCC CGATCACCGA TTTTTCCGGC GCTTCGATGC TGGAATTCGT ATCCTACGAA
TTCGAACCGC CGAAGTTCGA CGTTGACGAA TGCCGTCAGC GCGACCTGAC CTATGCTGCG
CCGCTGAAGG TGACGCTGCG CCTCATCGTG TTCGATATCG ACGAGGATAC GGGCGCAAAG
TCGATCAAGG ACATCAAGGA ACAGTCCGTC TACATGGGCG ACATGCCGCT CATGACCAAC
AACGGCACGT TCATCGTCAA CGGCACCGAG CGCGTCATCG TTTCCCAGAT GCACCGTTCG
CCGGGCGTCT TCTTCGACCA CGACAAGGGC AAGAGCCATT CTTCCGGCAA GCTGCTCTTT
GCTGCCCGCG TCATCCCTTA TCGCGGTTCC TGGCTCGATA TCGAATTCGA CGCCAAGGAT
ATCGTCTACG CCCGTATCGA CCGTCGCCGT AAGATCCCTG TCACGTCGCT GCTTATGGCG
CTCGGCATGG ACGGCGAGGA AATCCTCGAC ACCTTCTACA CGAAGTCGCT CTACAAGCGC
GACGGCGAAG GCTGGCGCAT TCCCTTCAAG CCGGAAACGC TGAAGGGTGC CAAGGCGATC
ACCGAGATGG TCGACGCCGA TACCGGCGAA GTCGTCGTTG AAGCCGGCAA GAAGCTGACC
CCGCGTCTGC TGCGCCAGCT GTCCGACAAG GGCCTGAAGG CGCTGAAGGC CGCTGACGAC
GATCTCTATG GCAACTACCT CGCCGGCGAC ATCGTCAACT ACTCCACCGG TGAAATCTAC
CTCGAAGCCG GTGACGAAAT CGACGAAAAG ACGCTCGGCA TCATCCTGGC GAACGGCTTC
GACGAGATCC CGGTTCTCGG CATCGACCAC ATCAATGTCG GCGCCTATAT CCGCAACACG
CTTTCGGCCG ACAAGAACGA GAACCGTCAG GACGCTCTGT TCGACATCTA CCGCGTCATG
CGTCCGGGCG AGCCGCCGAC CATGGAATCG GCCGAAGCCA TGTTCAACTC GCTGTTCTTC
GATGCGGAGC GTTACGACCT CTCCGCCGTC GGCCGCGTCA AGATGAACAT GCGTCTCGAC
CTGACCGTCG AAGACACCGT CCGCATCCTG CGCAAGGACG ACATCCTGGC CGTGGTCAGG
ATGCTGGTCG AACTGCGCGA CGGCAAGGGT GAGATCGACG ACATCGACAA CCTCGGCAAC
CGCCGCGTCC GCTCGGTCGG CGAGCTGATG GAAAACCAGT ACCGTCTCGG CCTGCTCCGC
ATGGAGCGCG CGATCAAAGA ACGCATGTCC TCGATCGAGA TCGACACGGT GATGCCGCAG
GATCTGATCA ACGCCAAGCC GGCGGCTGCC GCCGTTCGCG AATTCTTCGG TTCCTCGCAG
CTCTCGCAGT TCATGGACCA GGTCAACCCG CTCTCGGAAA TCACCCACAA GCGCCGTCTT
TCGGCTCTTG GCCCGGGTGG TCTGACCCGT GAGCGCGCCG GCTTCGAAGT CCGCGACGTG
CATCCGACCC ACTACGGCCG TATTTGCCCG ATCGAAACGC CTGAGGGCCC GAACATCGGT
CTGATCAACT CGCTTGCGAC CTTTGCCCGC GTCAACAAGT ACGGCTTCAT CGAAAGCCCG
TACCGTCGCA TCGTCGACGG CAGGGTGACA AGCGACGTGC TCTACCTCTC CGCCATGGAA
GAGGCGAAGT ACTACGTCGC CCAGGCCAAC GCCGAAATGA ACGCCGACGG TTCCTTCGTC
GACGAGTTCG TCGTCTGCCG TCATGCCGGC GAAGTCATGC TCGCACCCCG CGACAGCATG
AACCTGATGG ACGTTTCGCC GAAGCAGGTC GTTTCGGTCG CAGCCGCGCT CATCCCGTTC
CTGGAAAACG ATGACGCCAA CCGCGCGCTC ATGGGCTCGA ACATGCAGCG TCAGGCCGTG
CCGCTGCTGC GTGCCGAAGC CCCGTTCGTC GGGACCGGCA TGGAGCCGGT CGTTGCCCGT
GACTCAGGCG CTGCCATCGG CGCACGCCGC GGCGGCGTGG TCGACCAGGT CGACGCGACG
CGTATCGTTA TCCGCGCCAC GGAAGACCTC GAAGCCGGCA AATCCGGCGT CGATATCTAC
CGCCTGCAGA AGTTCCAGCG TTCGAACCAG AACACCTGCG TCAACCAGCG TCCGCTGGTC
ACCGTCGGTG ACGAGGTCAA CCGCGGCGAC ATCCTCGCCG ACGGCCCGTC GACCGACCTC
GGCGACCTGG CGCTCGGCCG CAACGCGCTC GTCGCGTTCA TGCCCTGGAA CGGCTACAAC
TACGAAGACT CGATCCTGCT CTCCGAGCGT ATCGTGGCCG ACGACGTGTT CACCTCCATC
CACATCGAGG AATTCGAAGT GATGGCGCGC GACACCAAGC TTGGTCCTGA GGAAATCACC
CGCGACATTC CGAACGTTTC GGAAGAAGCG CTGAAGAACC TCGACGAAGC CGGCATCGTC
TACATTGGCG CCGAAGTTCA GCCGGGCGAT ATTCTTGTCG GCAAGATCAC GCCGAAGGGC
GAAAGCCCGA TGACGCCGGA AGAAAAGCTT CTGCGCGCCA TCTTCGGCGA AAAGGCCTCC
GACGTGCGCG ACACTTCCAT GCGCATGCCA CCCGGCACCT ACGGTACGAT CGTCGAAGTC
CGCGTCTTCA ACCGCCATGG CGTTGAGAAG GACGAGCGCG CGATGGCAAT CGAGCGCGAA
GAGATCGAGC GTCTTGCAAA GGACCGCGAT GACGAGCAGG CGATCCTCGA TCGTAACGTC
TACGGCCGTC TGATCGAAAT GCTGCGCGGT CAGGCGTCCA TCGCCGGCCC GAAGGGCTTC
AAGAAGGGCA CCGAGCTTTC GAATGCCGTC GTCTCCGAAT ATCCCCGCTC GCAGTGGTGG
ATGTTCGCCG TCGAGGACGA GAAGGTTCAG AGCGAGCTCG AAGCGCTCCG CGGCCAGTAC
GACGAATCCA AGTCGCGCCT TGAACAGCGC TTCATGGACA AGGTCGAAAA GGTCCAGCGC
GGCGATGAAA TGCCTCCTGG CGTCATGAAG ATGGTCAAGG TCTTCGTCGC AGTGAAGCGC
AAGATCCAGC CGGGCGACAA GATGGCCGGC CGTCACGGGA ACAAGGGCGT CGTCTCGCGC
ATTGTGCCTG TCGAGGACAT GCCGTTCCTC GAAGACGGCA CGCATGTCGA CGTCGTTCTG
AACCCGCTCG GCGTTCCCTC GCGCATGAAC GTCGGCCAGA TCCTCGAAAC CCACCTGGGT
TGGGCTTGCG CCGGCATGGG TCGCCAGATC GGCGAACTGA TCGACGCATA CAAGGCCAAT
GGCAACATCG AGCCGCTGCG CAAGACCATC GGCGATGTCG TCGGTGACGG TCCGAAGGCC
GAACAGGTCC AGGATTTCGA CGACGACTCG GTTCTGCGTC TCGCCGACCA GTGGAAGCGC
GGCGTTTCGA TTGCAACGCC TGTCTTCGAC GGCGCCAACG AAGCCGACGT CAACGACATG
TTGCGTCTGG CGGGTCTCAA GGACACCGGT CAGTCGACGC TCTATGACGG CCGTACCGGC
GAGCAGTTCG ACCGCCAGGT GACCGTGGGC TACATCTACA TGCTGAAGCT CAACCACTTG
GTCGACGACA AGATCCATGC CCGTTCGATC GGTCCTTACT CGCTCGTGAC CCAGCAGCCG
CTGGGCGGCA AGGCGCAGTT CGGCGGTCAG CGCTTCGGCG AAATGGAAGT CTGGGCGCTC
GAAGCTTACG GCGCGGCCTA CACGCTGCAG GAAATGCTGA CGGTGAAGTC GGACGACGTC
GCCGGCCGCA CCAAGGTCTA CGAAGCCATC GTCCGCGGAG ACGACACGTT CGAAGCCGGT
ATTCCGGAAA GCTTCAACGT TCTCGTCAAG GAAATGCGCT CGCTGGGCCT CAGCGTCGAG
CTCGAAAACA CCAAGCTTGA CGAGGCGCAG GCAGCGCAGC TGCCCGACGC GGCCGAGTAA
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| Protein sequence | MAQTLSFNGR RRVRKFFGKI PEVAEMPNLI EVQKASYDQF LMVEEPKGGR PDEGLQAVFK
SVFPITDFSG ASMLEFVSYE FEPPKFDVDE CRQRDLTYAA PLKVTLRLIV FDIDEDTGAK
SIKDIKEQSV YMGDMPLMTN NGTFIVNGTE RVIVSQMHRS PGVFFDHDKG KSHSSGKLLF
AARVIPYRGS WLDIEFDAKD IVYARIDRRR KIPVTSLLMA LGMDGEEILD TFYTKSLYKR
DGEGWRIPFK PETLKGAKAI TEMVDADTGE VVVEAGKKLT PRLLRQLSDK GLKALKAADD
DLYGNYLAGD IVNYSTGEIY LEAGDEIDEK TLGIILANGF DEIPVLGIDH INVGAYIRNT
LSADKNENRQ DALFDIYRVM RPGEPPTMES AEAMFNSLFF DAERYDLSAV GRVKMNMRLD
LTVEDTVRIL RKDDILAVVR MLVELRDGKG EIDDIDNLGN RRVRSVGELM ENQYRLGLLR
MERAIKERMS SIEIDTVMPQ DLINAKPAAA AVREFFGSSQ LSQFMDQVNP LSEITHKRRL
SALGPGGLTR ERAGFEVRDV HPTHYGRICP IETPEGPNIG LINSLATFAR VNKYGFIESP
YRRIVDGRVT SDVLYLSAME EAKYYVAQAN AEMNADGSFV DEFVVCRHAG EVMLAPRDSM
NLMDVSPKQV VSVAAALIPF LENDDANRAL MGSNMQRQAV PLLRAEAPFV GTGMEPVVAR
DSGAAIGARR GGVVDQVDAT RIVIRATEDL EAGKSGVDIY RLQKFQRSNQ NTCVNQRPLV
TVGDEVNRGD ILADGPSTDL GDLALGRNAL VAFMPWNGYN YEDSILLSER IVADDVFTSI
HIEEFEVMAR DTKLGPEEIT RDIPNVSEEA LKNLDEAGIV YIGAEVQPGD ILVGKITPKG
ESPMTPEEKL LRAIFGEKAS DVRDTSMRMP PGTYGTIVEV RVFNRHGVEK DERAMAIERE
EIERLAKDRD DEQAILDRNV YGRLIEMLRG QASIAGPKGF KKGTELSNAV VSEYPRSQWW
MFAVEDEKVQ SELEALRGQY DESKSRLEQR FMDKVEKVQR GDEMPPGVMK MVKVFVAVKR
KIQPGDKMAG RHGNKGVVSR IVPVEDMPFL EDGTHVDVVL NPLGVPSRMN VGQILETHLG
WACAGMGRQI GELIDAYKAN GNIEPLRKTI GDVVGDGPKA EQVQDFDDDS VLRLADQWKR
GVSIATPVFD GANEADVNDM LRLAGLKDTG QSTLYDGRTG EQFDRQVTVG YIYMLKLNHL
VDDKIHARSI GPYSLVTQQP LGGKAQFGGQ RFGEMEVWAL EAYGAAYTLQ EMLTVKSDDV
AGRTKVYEAI VRGDDTFEAG IPESFNVLVK EMRSLGLSVE LENTKLDEAQ AAQLPDAAE
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