Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1295 |
Symbol | |
ID | 6980019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 1316414 |
End bp | 1319068 |
Gene Length | 2655 bp |
Protein Length | 884 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643396012 |
Product | DNA topoisomerase I |
Protein accession | YP_002280815 |
Protein GI | 209548898 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.722616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00167989 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATGTTG TAGTGGTGGA ATCGCCTGCC AAGGCCAAGA CGATCAACAA GTATCTGGGT TCGGGATACA AAGTGCTCGC CTCTTTCGGC CATGTGCGCG ATCTGCCTGC CAAGGATGGC TCGGTCCTCC CCGATCAGGA TTTCGAAATG CTTTGGGAGG TCGACGGGGC CTCGGCCAAG CGGATGAAGG ACATCGCCGA CGCGGTGAAA TCGTCCGACG GCCTGTTTCT CGCAACCGAC CCGGATCGCG AAGGCGAAGC GATTTCCTGG CACGTCCTCG ATATGTTGAA CAAGAAGCGG GTGCTGAACG GCAAGCCGGT CAAGCGTGTC GTCTTCAACG CGATCACCAA GAAGGCGGTG CTCGACGCGA TGGCCGATCC GCGCGACATC GACGTGCCGC TGGTCGACGC CTATCTGGCG CGCCGCGCGC TCGACTATCT CGTCGGCTTC AATCTTTCGC CGGTCCTCTG GCGCAAGCTG CCGGGCGCAC GCTCGGCCGG CCGCGTCCAG TCGGTGGCGC TTCGCTTGGT CTGCGACCGC GAATCCGAAA TCGAGCGCTT CATTTCGGAA GAATACTGGA ACATCTCAGC GCTTCTGAAG ACGCCGCGCG GCGACGAGTT CGAGGCAAGG CTGGTTTCGG CGAACGGCAA GCGGCTGCAG CCGCGCGCGA TCGGCAACGG CGAGGATGCG GGCCGCCTGA AGGCATTGCT GGACGGCGCG AGCTATGTCG TCGACACGGT CGAGGCCAAG CCGGTCAAGC GCAATCCGGG ACCGCCATTT ACGACCTCGA CCCTGCAGCA GGCCGCCTCC TCCAATCTTG GCTTCTCCGC CTCGCGCACC ATGCAGATAG CCCAGAAGCT TTATGAAGGC GTCGATATCG GCGGCGAGAC CGTCGGTCTC ATCACTTATA TGCGAACCGA CGGCGTGCAG ATGGCGCCGG AGGCGATCGA TGCCGCCCGC AGCGCCATCG TCGACCAGTT CGGCGAGCGT TACATGCCCG AAAAGGCGCG CTTCTATTCC ACCAAGGCCA AGAACGCCCA GGAGGCGCAC GAGGCGATCC GCCCGACCGA TTTCTACCGC TCGCCTGACC GTGTGCGCCA ATTCCTCGAT GCCGACCAGA TCCGGCTCTA CGACCTGATC TGGAAGCGCG GCATCGCCAG CCAGATGGCC TCGGCCGAAA TCGAGCGCAC GACGGCTGAA ATCACCGCCG ACAACAAGGG CGAGAAGGCC GGGCTGCGCG CCGTCGGCTC GGTCATTCGC TTCGATGGCT TCATTGCCGC CTACACCGAT CAGAAGGAAG ATGGCGAGCA GAGCGACGAC GGCGACGAGG ATGGCCGCCT GCCGGAGATC AATGCGCGCG AGACGCTCGC CAAGCAGAAG ATCAATTCGA CCCAGCATTT TACCGAGCCG CCGCCGCGCT ACTCGGAAGC CTCGCTGATC AAGAAGATGG AAGAGCTCGG CATCGGCCGC CCCTCCACCT ATGCCGCGAC GCTGGCCACA CTGCGCGACC GCGACTATGT GACGATCGAC AAGCGCAAGC TGATCCCGCA GGCCAAGGGC CGGCTTGTGA CGGCTTTCCT CGAAAGCTTC TTCACCAAAT ATGTCGAATA CGACTTCACC GCCGATCTCG AGGAAAAGCT CGACCGGATT TCCGCCGGCG AGCTGAACTG GAAGCAGGTG CTGCGCGATT TCTGGAAGGA TTTCTTCGCC CAGATCGAAG ACACCAAGGA ACTGCGCGTC ACCAATGTGC TCGATTCGCT GAACGAGGCG CTGGCGCCGC TGGTCTTCCC GAAGCGGGAG GACGGCAGCG ATCCCCGGAT CTGCCAGGTC TGCGGCACCG GCAACCTGTC GCTGAAGCTC GGCAAATATG GCGCCTTTGT CGGCTGCTCG AACTATCCGG AATGCAATTA CACCCGCCAG CTCTCCTCCG AAAACGGCGG AGAAGCGGAT GGTGCTGCCA TCAACGAACC GAAGAACCTC GGCACCGATC CGACGACCGG CGAGGAACTG ACGCTGCGAT CCGGCCGCTT CGGCCCCTAT ATCCAGCGCG GCGACGGCAA GGAGGCCAAA CGCGCTTCGC TGCCGAAGGG CTGGAAGCCT GAGGACATCG ACTACGAAAA GGCCATGGCG CTGATTTCGC TGCCGCGCGA TATCGGCAAA CATCCGGAAT CCGGCAAGAT GATCTCATCA GGCATCGGCC GCTATGGGCC GTTCCTGCTG CATGACGGTT CCTATGCCAA TCTGGAAACG ATCGAGGACG TGTTTTCGGT CGGGCTCAAC CGCGCCGTGA CCGTCATTGC CGAAAAGGCA AACCAGGCAC CGGGCCGTGG TTCGCGCGGC ACGCCGGCGG CGCTGAAGAC GCTCGGCGAT CATCCGGACG GCGGCGCAAT CACCGTTCGC GACGGCAAGT ACGGGCCTTA TGTCAACTGG GGCAAGGTCA ATGCCACCCT GCCGAAGGGC AAGGATCCGC AGGCGATCAC CGTCGAAGAG GCGCTTGCGC TGATCACGGA GAAGGCCGGT AAGGCGCCCG CCGGCAAGAC GAGCAAGGCG AAAGCCAAGC CGAAGGCGGC CGCCGCCGAA GCCAAGACCA CCAAGACGGC GGCCAAGCCG AAGGCAACGA AGGCGAAAGC GCCCGCGAAA TCGAAAAAGA GCTGA
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Protein sequence | MNVVVVESPA KAKTINKYLG SGYKVLASFG HVRDLPAKDG SVLPDQDFEM LWEVDGASAK RMKDIADAVK SSDGLFLATD PDREGEAISW HVLDMLNKKR VLNGKPVKRV VFNAITKKAV LDAMADPRDI DVPLVDAYLA RRALDYLVGF NLSPVLWRKL PGARSAGRVQ SVALRLVCDR ESEIERFISE EYWNISALLK TPRGDEFEAR LVSANGKRLQ PRAIGNGEDA GRLKALLDGA SYVVDTVEAK PVKRNPGPPF TTSTLQQAAS SNLGFSASRT MQIAQKLYEG VDIGGETVGL ITYMRTDGVQ MAPEAIDAAR SAIVDQFGER YMPEKARFYS TKAKNAQEAH EAIRPTDFYR SPDRVRQFLD ADQIRLYDLI WKRGIASQMA SAEIERTTAE ITADNKGEKA GLRAVGSVIR FDGFIAAYTD QKEDGEQSDD GDEDGRLPEI NARETLAKQK INSTQHFTEP PPRYSEASLI KKMEELGIGR PSTYAATLAT LRDRDYVTID KRKLIPQAKG RLVTAFLESF FTKYVEYDFT ADLEEKLDRI SAGELNWKQV LRDFWKDFFA QIEDTKELRV TNVLDSLNEA LAPLVFPKRE DGSDPRICQV CGTGNLSLKL GKYGAFVGCS NYPECNYTRQ LSSENGGEAD GAAINEPKNL GTDPTTGEEL TLRSGRFGPY IQRGDGKEAK RASLPKGWKP EDIDYEKAMA LISLPRDIGK HPESGKMISS GIGRYGPFLL HDGSYANLET IEDVFSVGLN RAVTVIAEKA NQAPGRGSRG TPAALKTLGD HPDGGAITVR DGKYGPYVNW GKVNATLPKG KDPQAITVEE ALALITEKAG KAPAGKTSKA KAKPKAAAAE AKTTKTAAKP KATKAKAPAK SKKS
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