Gene Rleg2_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0980 
Symbol 
ID6979698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp999043 
End bp999960 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content64% 
IMG OID643395691 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_002280500 
Protein GI209548583 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCA AACTCGGCAT GTCGCCCATC GCCTGGTGGA ACGACGATCT TCCTGAACTC 
AGCGACGACG TGTCCCTCGA GGAATGCCTG CGGCAATCGC GCGGCGCCGG TTTCACCGGC
ATGGAACAGG GCCGTCGTTT CCCCAGCAAT CCCGAGGAAA TGCTGCCGAT CCTGCGCGCC
GCCGACGTGA CGCTCTGCGG CGGCTGGTTC TCCGGCACGC TGGTCAATGA GGAGCTCACG
GCCAACAAGG ACCGCATCGC TCCGATGATC GAATTGTTCA AGGCGGTCAA TGCGCCTTGC
ATCGTTTACG GCGAGGTCGG CCGCTCCATC CAGGGCGACC GCTCCAAGCC GCTCGCCACC
AAACCGCGCC TTGCCGATGA CGAGATGAAG GCCTATGCGC GCCGCGTCAC GGAATTCGGC
GAATGGTGCG CCGAACAGGG CATGCCGCTC TCCTATCACC ATCATATGGC CGCCGTTGTC
GAAACCGAGC CGGAACTCGA CGCCTTCATG CGTTCTTCGG GCGAAGGCAT TCCGCTGCTG
CTCGATGCCG GCCATCTCGC CTTTGCCGGC GGCGACGTGC TGCGCGCCAT CGACCATCAC
CACGCCCGCA TCAACCATGT TCACGTCAAG GACATCCGCA AGTCCGTCGT CGATGGGCTG
GACCGCAGCC GGCAGTCCTT CCTCGACGCA GTGGCGCTCG GCGCCTTCAC CGTGCCGGGC
GACGGCTCGC TCGATTTCGG CGCCATCGTC CTGCGGCTGG CCGATCACGG CTATGAAGGC
TGGTTCGTCG TCGAGGCCGA GCAGGATCCG CGCAAGGCGC CGCCGCAGAA AATGGCCGAG
ATCGGCCACG CGGAATTGAT ACGGGTGATG ACGGCTGCCG GTTATACGGT GGAGACCGAA
GGCTTCCCAA AGGGATAA
 
Protein sequence
MKAKLGMSPI AWWNDDLPEL SDDVSLEECL RQSRGAGFTG MEQGRRFPSN PEEMLPILRA 
ADVTLCGGWF SGTLVNEELT ANKDRIAPMI ELFKAVNAPC IVYGEVGRSI QGDRSKPLAT
KPRLADDEMK AYARRVTEFG EWCAEQGMPL SYHHHMAAVV ETEPELDAFM RSSGEGIPLL
LDAGHLAFAG GDVLRAIDHH HARINHVHVK DIRKSVVDGL DRSRQSFLDA VALGAFTVPG
DGSLDFGAIV LRLADHGYEG WFVVEAEQDP RKAPPQKMAE IGHAELIRVM TAAGYTVETE
GFPKG