| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0389 |
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| Symbol | rirA |
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| ID | 6979104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 402484 |
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| End bp | 402966 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643395102 |
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| Product | iron-responsive transcriptional regulator |
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| Protein accession | YP_002279914 |
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| Protein GI | 209547997 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00187363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.229909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGTTGA CGAAGCAGAC CAATTATGCG GTTCGCATGT TGATGTATTG TGCTGCCAAC
GACGGGCACT TGAGCCGGAT TCCGGAAATC GCCAGGGCTT ACGGCGTGTC CGAACTGTTT
CTTTTCAAGA TCCTCCAGCC GCTGAACAAG GCCGGCCTCG TCGAAACCGT GCGCGGTCGC
AATGGCGGCG TGCGCCTGGG CAAGCCGGCC GCCGACATTA CGCTGTTCGA CGTCGTCAGG
GTGACGGAAG ACAGTTTCGC CATGGCCGAA TGCTTCGAGG ATGACGGCGT GGTCGAATGC
CCGCTGGTTG ACAGCTGCGG CCTGAATTCG GCGCTGCGCA AGGCGCTTAA CGCCTTCTTC
GCCGTGCTGT CGGAATATTC CATCGACGAC CTCGTCAAGG CGCGTCCACA GATCAATTTC
CTTCTCGGAA TCACCGGCGA GCAGCCGTAT CGCAAACCCG CGATCGTTGC GCCTGCCGCC
TGA
|
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| Protein sequence | MRLTKQTNYA VRMLMYCAAN DGHLSRIPEI ARAYGVSELF LFKILQPLNK AGLVETVRGR
NGGVRLGKPA ADITLFDVVR VTEDSFAMAE CFEDDGVVEC PLVDSCGLNS ALRKALNAFF
AVLSEYSIDD LVKARPQINF LLGITGEQPY RKPAIVAPAA
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