| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_0225 |
|---|
| Symbol | mscL |
|---|
| ID | 6978937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 231481 |
|---|
| End bp | 231918 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643394936 |
|---|
| Product | large-conductance mechanosensitive channel |
|---|
| Protein accession | YP_002279751 |
|---|
| Protein GI | 209547834 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1970] Large-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACG AATTCAAGGC CTTTATCGCC CGTGGCAATG TCATGGATCT TGCCGTCGGC
GTCATCATCG GCGGCGCCTT CGGCGGCATC GTCAAATCTC TGGTCGATGA CCTGATCATG
CCGATCGTCG GCGCCATTTT CGGCGGCTTC GATTTTTCCA ATTATTTCCT GCCGCTCTCC
TCGGCCGTCA ACGCGCCGAC ACTGGCCGCA GCCCGCGCGC AAGGGGCGGT GTTTGCCTAT
GGCAGCTTCC TCACCGTGCT CATCAACTTC CTGATCCTTG CCTGGATCAT CTTCCTGATG
GTCAAGGGCG TGAACTATCT GCGCCTGCAG GTCGAGCGCC AGGAAAAGGC CGCACCGGAA
GAACTGCCCC CGCCGCCGGC CGATGTTCAG CTGCTGACGG AGATTCGCGA TCTGCTGGCC
ACACGTCCGA CGGCCTGA
|
|---|
| Protein sequence | MLNEFKAFIA RGNVMDLAVG VIIGGAFGGI VKSLVDDLIM PIVGAIFGGF DFSNYFLPLS
SAVNAPTLAA ARAQGAVFAY GSFLTVLINF LILAWIIFLM VKGVNYLRLQ VERQEKAAPE
ELPPPPADVQ LLTEIRDLLA TRPTA
|
|---|
| |