Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0213 |
Symbol | |
ID | 6978925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 214691 |
End bp | 216487 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643394924 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_002279739 |
Protein GI | 209547822 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGTCT ACAAGGCCCC GGTAAACGAT ACGCTCTTCG TCCTGAACGA CGTGCTGGGC CTCGAACGCT ACAACAATCT GCCGGGTTTT GCCGATGCCA CGCCCGATAT GATCGAAGCG ATCCTCGGCG AGGCGGCCAA GGTGGCCGAA GAAGTTCTCT TTCCCGTGAA TTATTCCGGT GATCAGGAAG GCTGCACGCG CCACGATGAT GCCAGCGTCT CGACGCCGAA GGGCTTCCAG GATGCTTACA AAGCCTATCG CGATGGCGGC TGGATCGGTC TTGCGGTACC GGAGGAATTC GGCGGGCAGG GGCTTCCCTA TACGCTGCAT ACTGCCGTCG GCGAATATAC CTCCGCCGCC AACATGTCGT TGATGATGTA TCCGGGCCTG ACGCAGGGCG CGATCGCCGC GATCCTCGTC CACGGTTCGA CCGAGCAGAA GGCGACCTAT CTGCCGAAGA TGGTGGACGG CGCCTGGACC GGCACCATGA ACTTGACCGA GCCGCATTGC GGCACCGATC TCGGCATGCT GCGCACCAAG GCAGTGCCGC AAGCCGACGG CAGCTATAAG ATCGCCGGCC AGAAGATATT CATCTCCGCC GGTGAGCATG ACCTGGCCGA CAATATCGTC CATCTGGTGC TTGCCCGCAT CGAGGGCGCA CCGGAGGGTA CCAAGGGCAT CTCGCTCTTC ATCGTGCCGA AATTCCTGGT CGGCAAGGAC GGTGCGCTCG GCGCCCGCAA CGCCGTCACC TGCGGCGCGA TCGAACACAA GATGGGCATC CACGCCAACG CCACCTGCGT CATGAATTAC GACGAGGCGA CCGGCTTCCT GATCGGCGCC GAAAATCGCG GCCTCAACGC CATGTTCGTG ATGATGAACG AGGCCCGTCT GATGGTCGGC CTGCAGGGCA TCGCCATTTC CGAGATCGCC TATCAGAATG CCGCCAACTA CGCCCGCGAC CGCATCCAGG GTCGTTCGCT GTCCGGCCCC AAGGCGCCGG ATAAGAAGGC CGATCCGATC ATCGTCCATC CCGATATCCG CCGCACGCTG ATGACCATTC GCGCCTTCAA CGAGGCCGGC CGCGCCTTCC TGCTGTGGAC GGCGCTGAAA TCCGATATCG CCCACCGCGC CACTGACGAC AAGGAGCGCC AGACGGCCGA CGATATTCTC GGCCTCGTCA CCCCGATCCT CAAGGGCGTG ATGACCGACA AGGGCTTCGA CCATGCCGTC ATGGCCCAGC AGGTCTTCGG CGGCCACGGC TATATCGAAG AACACGGCAT GAGCCAGTAT GTGCGCGATG CCCGCATCGC CATGATCTAT GAAGGCGCCA ACGGCATTCA GGCGCTTGAT CTCGTCGGCC GCAAGCTGGC TCTGAACGGT GGCCGCGCCG CCATGGCGCT GTTCAAGGAG ATCGGCGATT TCTGTGAGGA GAACCGCAGC GACGAAAAAC TCTCCTTCTT CACCAAGCAT CTGAAGAAGG GCTTGAACGA CGTCCAGGCC GCGACCATGT GGTTCATGCA GAACGCCATG GCCAAGCCCG ACAATGCCGG CGCCGGCTCG ACCGACTATA TGCACCTCTT CGGCCTCGTC GTTCTCGGCT ATATGTGGGC CAAGATGGCG AAAGCCGCCG AGGACGGCCT TGCTTCAGGT GATGGAGCCC GCGAGGATTT CCTGAGGAAT AAGCTGATCA CGGCAAAATT CTTCATGGAG CGCATCATGC CGGAAACCGC CCTTCGCAAG GCCCGCATCG AAGCCGGCGC CGACACGATG ATGGAGCTGG CCGCAGAAGC GTTTTGA
|
Protein sequence | MPVYKAPVND TLFVLNDVLG LERYNNLPGF ADATPDMIEA ILGEAAKVAE EVLFPVNYSG DQEGCTRHDD ASVSTPKGFQ DAYKAYRDGG WIGLAVPEEF GGQGLPYTLH TAVGEYTSAA NMSLMMYPGL TQGAIAAILV HGSTEQKATY LPKMVDGAWT GTMNLTEPHC GTDLGMLRTK AVPQADGSYK IAGQKIFISA GEHDLADNIV HLVLARIEGA PEGTKGISLF IVPKFLVGKD GALGARNAVT CGAIEHKMGI HANATCVMNY DEATGFLIGA ENRGLNAMFV MMNEARLMVG LQGIAISEIA YQNAANYARD RIQGRSLSGP KAPDKKADPI IVHPDIRRTL MTIRAFNEAG RAFLLWTALK SDIAHRATDD KERQTADDIL GLVTPILKGV MTDKGFDHAV MAQQVFGGHG YIEEHGMSQY VRDARIAMIY EGANGIQALD LVGRKLALNG GRAAMALFKE IGDFCEENRS DEKLSFFTKH LKKGLNDVQA ATMWFMQNAM AKPDNAGAGS TDYMHLFGLV VLGYMWAKMA KAAEDGLASG DGAREDFLRN KLITAKFFME RIMPETALRK ARIEAGADTM MELAAEAF
|
| |