Gene Rleg2_0151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_0151 
Symbol 
ID6978861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand- 
Start bp147731 
End bp148720 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content62% 
IMG OID643394862 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_002279679 
Protein GI209547762 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00856305 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0288368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG TGAAATCCCT TCTGTCGCGC CGCGCCTTTA CCGCGCTCGC CGGCGCCGCC 
GTCATCGCCA CGGCGATGCC GGTCACGTCC TTTGCCGCCG ACGTGACGAT CCCGATCATC 
GTCAAGGACA CGACGTCCTT CTACTGGCAG ATCGTTCTGG CCGGCGCCCG CAAGGCCGGC 
AAGGATCTCG GCGTCAACGT GCCGGAACTC GGCGCCCAGG CGGAATCCGA CATCAACGGC 
CAGATCAGCA TTCTGGAGAA CGCCGTTGCC GGCAAACCGG CCGCCGTCGT CATTTCGCCG 
ACCGAATTCA AGGCGCTCGG CAAGCCGATC GATGAAGCCG CCAAGTCGGT TCCGATCATC 
GGCATCGATT CAGGCGCCGA CTCCAAGGCG TTCAAGTCGT TCCTGACGAC CGACAACGTC 
CAGGGCGGTC GCATCGCCGC CGACGGTCTT GCCGCCGCCA TCAAGGAGAT GACGGGCAAG 
GAAGAAGGCG AAATCGTCAT CCTCACCAAT CTTCCCGGCG TCGGCTCGCT GGAGCAGCGC 
CGCGAAGGCT TCCTGGATCA GATCAAGACC AAGCATCCGG GCCTCAAGGT CATCGCCGAC 
AAGTATGGCG ACGGCCAGGC AACGACCGGC CTCAACATGA TGACCGACCT GATTACGGCC 
AATCCGAAGC TCGTCGGCGT CTTCGCCTCG AACCTGATCC TGGCGCAGGG TGTTGGTCAG 
GCGATCGCCG AAAACAAGCT CGGCGACAAG ATCAAGGTCA TCGGCTTCGA CAGCGACGAC 
AAGACGGTCG GCTTCCTCAA GGACGGCGCC ATTGCCGGTC TCGTCGTCCA GGACCCCTAC 
CGCATGGGTT ATGACGGCAT CAAGACCGCG CTTGCCGTCT CCAAGGGCGA GAAGGTCGAA 
GCCAATGTCG ATACCGGCGC CAACCTCGTC ACCAAGGCGA ATATGGCCGA TCCGAAGATC 
GACGCCCTGC TGAACCCGAA GATCAAGTAA
 
Protein sequence
MTIVKSLLSR RAFTALAGAA VIATAMPVTS FAADVTIPII VKDTTSFYWQ IVLAGARKAG 
KDLGVNVPEL GAQAESDING QISILENAVA GKPAAVVISP TEFKALGKPI DEAAKSVPII 
GIDSGADSKA FKSFLTTDNV QGGRIAADGL AAAIKEMTGK EEGEIVILTN LPGVGSLEQR 
REGFLDQIKT KHPGLKVIAD KYGDGQATTG LNMMTDLITA NPKLVGVFAS NLILAQGVGQ 
AIAENKLGDK IKVIGFDSDD KTVGFLKDGA IAGLVVQDPY RMGYDGIKTA LAVSKGEKVE 
ANVDTGANLV TKANMADPKI DALLNPKIK