Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0061 |
Symbol | |
ID | 6978770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 61172 |
End bp | 62365 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643394772 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_002279590 |
Protein GI | 209547673 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.03403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTA CCGATCCCGT CGCCAATCTT CAGACGCTGA TTCGCTGCCC CTCGGTGACT CCAGCCGAAG GCGGCGCGCT GTCGGCGCTC GACGCCATGC TTGCGCCGCT CGGCTTCACC GTCGACAAGG TGAAAGCGAG CGAAGCGGGA ACCGCCGATA TTGAAAACCT CTATGCCCGT CTCGGCAAGG ACGGCCCGCA TCTGATGTTT GCCGGCCACA CCGATGTCGT GCCGGTCGGC GACGAGGCCG ACTGGACGCA TCCGCCCTTC GCCGCCGAGA TATCGAAGGG CGAGCTCTTC GGCCGCGGTG CCGTCGACAT GAAGGGCGGC ATCGCCTGCT TCATCGCCGC CGTCGCCCGC CATATCGAGA AAAACGGGCC GCCCAAGGGC TCGATTTCCT TCCTGATCAC CGGCGATGAG GAAGGCCCGG CGATCAACGG CACAATCAAG CTTCTGCGGT GGGCGGCCGA ACGCGGCGAG CGCTGGGATG CCTGCCTGGT CGGCGAGCCC ACCAATCCGG ACAGGCTGGG CGACATGATC AAGATCGGCC GGCGCGGCTC GCTGTCGGGC AAGATCACCG TGCACGGCGT CCAGGGCCAT GCCGCCTATC CGCATCTTGC CGACAATCCG GTGCGCGGCA TGCTGCAGCT GACGCAGGCG CTGATGGATC CGCCCTTCGA CGGCGGCACC GACGATTTCC AGCCCTCGAA CCTCGAGGTG ACCACGGTCG ATGTCGGCAA TCCGGCGACC AACGTCATTC CGGCCAAGGC ATCGGCCAGC TTCAACATCC GCTTCAACGA CAGCTGGACG GCCGAGACGC TGCGGGCCGA AATCCTGCGG CGCCTCGACG CCGCCGCCGG AGACGGCCGG CTGCGGCCGG GCCGCGAACC GGTGAAATAC GATATCGTCT GGGCCGACCG GCCGAGCCAT GTCTTCCTGA CCCGCAACAA TGCCCTGATC GCGTCGCTGT CATCAGCCGT CGAAGGCGTG ATCGGCCGCT CGCCTAAGCT TTCCACAACC GGCGGCACCT CGGATGCGCG TTTCATCAAG GATTATTGCC CGGTCGTCGA GTTCGGCCTC GTCGGCCAGA CGATGCACAT GGTCGACGAG CGCGTCGCCG TTTCCGATCT GGAGACGCTG ACGGCGATCT ACGAGACCTT CATTGCCCAC TGGTTCGCCA ATGCCGGGGC TTAG
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Protein sequence | MTATDPVANL QTLIRCPSVT PAEGGALSAL DAMLAPLGFT VDKVKASEAG TADIENLYAR LGKDGPHLMF AGHTDVVPVG DEADWTHPPF AAEISKGELF GRGAVDMKGG IACFIAAVAR HIEKNGPPKG SISFLITGDE EGPAINGTIK LLRWAAERGE RWDACLVGEP TNPDRLGDMI KIGRRGSLSG KITVHGVQGH AAYPHLADNP VRGMLQLTQA LMDPPFDGGT DDFQPSNLEV TTVDVGNPAT NVIPAKASAS FNIRFNDSWT AETLRAEILR RLDAAAGDGR LRPGREPVKY DIVWADRPSH VFLTRNNALI ASLSSAVEGV IGRSPKLSTT GGTSDARFIK DYCPVVEFGL VGQTMHMVDE RVAVSDLETL TAIYETFIAH WFANAGA
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