Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_0055 |
Symbol | def |
ID | 6978764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 57537 |
End bp | 58052 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643394766 |
Product | peptide deformylase |
Protein accession | YP_002279584 |
Protein GI | 209547667 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0323144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA AGCCACTCAT CATTCTTCCC GATCCTATTC TCCGCCAGGC CTCCAAGCCG ATCGAGCGGG TCGATGCCGA TCTGCAGGGT CTTGCCGACG ATATGCTGGA AACCATGTAC GACGCGCCGG GCATCGGCCT TGCGGCGATC CAGATCGGCG TGCCGCGCCG CATGCTGGTC ATCGACGTGT CGCGCGAGGG CGAGGAAAAG CAGCCGCAGG TCTTCATCAA CCCGGAGATC GTCAAATCCT CCGACGAGCG CTCGGTCTAT GAGGAAGGCT GCCTGTCTAT CCCGGATTAT TATGCCGAGG TCGAACGCCC CGCTGTCGTC TCGGTCAAAT TTCTCGACCG GAACGGCAAG GAACAGACGG TGGAAGCCGA TGGCCTGCTC GCCACCTGCC TGCAGCACGA GATCGACCAT CTGAACGGCG TACTGTTCAT CGATTATATC TCGCGGCTGA AGCGGGAGAT GGTGATCAAG AAGTTCACCA AGGCGGCAAA GTCCAAGGCG CTCTGA
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Protein sequence | MTIKPLIILP DPILRQASKP IERVDADLQG LADDMLETMY DAPGIGLAAI QIGVPRRMLV IDVSREGEEK QPQVFINPEI VKSSDERSVY EEGCLSIPDY YAEVERPAVV SVKFLDRNGK EQTVEADGLL ATCLQHEIDH LNGVLFIDYI SRLKREMVIK KFTKAAKSKA L
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